Gene : Carub.0006s0856 C. rubella v1.1
Defline:  (1 of 4) PTHR10788//PTHR10788:SF19 - TREHALOSE-6-PHOSPHATE SYNTHASE // TREHALOSE-PHOSPHATE PHOSPHATASE E-RELATED Genomic Order:  856
Name:  ? Carub.0006s0856 Secondary Identifier:  ? PAC:39249336
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s0856 0.5kb upstream 0.5kb upstream 3043 true scaffold_6: 3101431-3104473 Capsella rubella
Carub.0006s0856 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 3101431-3101930 Capsella rubella
Carub.0006s0856 0.5kb downstream 0.5kb downstream 3043 true scaffold_6: 3101931-3104973 Capsella rubella
Carub.0006s0856 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 3104474-3104973 Capsella rubella
Carub.0006s0856 1.0kb upstream 1.0kb upstream 3543 true scaffold_6: 3100931-3104473 Capsella rubella
Carub.0006s0856 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 3100931-3101930 Capsella rubella
Carub.0006s0856 1.0kb downstream 1.0kb downstream 3543 true scaffold_6: 3101931-3105473 Capsella rubella
Carub.0006s0856 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 3104474-3105473 Capsella rubella
Carub.0006s0856 2.0kb upstream 2.0kb upstream 4543 true scaffold_6: 3099931-3104473 Capsella rubella
Carub.0006s0856 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 3099931-3101930 Capsella rubella
Carub.0006s0856 2.0kb downstream 2.0kb downstream 4543 true scaffold_6: 3101931-3106473 Capsella rubella
Carub.0006s0856 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 3104474-3106473 Capsella rubella
Carub.0006s0856 5.0kb upstream 5.0kb upstream 7543 true scaffold_6: 3096931-3104473 Capsella rubella
Carub.0006s0856 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 3096931-3101930 Capsella rubella
Carub.0006s0856 5.0kb downstream 5.0kb downstream 7543 true scaffold_6: 3101931-3109473 Capsella rubella
Carub.0006s0856 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 3104474-3109473 Capsella rubella
Carub.0006s0856 10.0kb upstream 10.0kb upstream 12543 true scaffold_6: 3091931-3104473 Capsella rubella
Carub.0006s0856 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 3091931-3101930 Capsella rubella
Carub.0006s0856 10.0kb downstream 10.0kb downstream 12543 true scaffold_6: 3101931-3114473 Capsella rubella
Carub.0006s0856 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 3104474-3114473 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362885 5261 Brassicaceae View MSA
123838730 5264 Brassicales-Malvales View MSA
124345863 5266 SBM View MSA
124249781 5268 Malvidae View MSA
124069564 5270 Rosid View MSA
123746966 5271 Pentapetalae View MSA
122786046 5272 Eudicot View MSA
122042129 5273 Angiosperm View MSA
121351669 5274 Embryophyte View MSA
123427869 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain