Gene : Carub.0006s0852 C. rubella v1.1
Defline:  (1 of 3) K15559 - regulator of Ty1 transposition protein 103 (RTT103) Genomic Order:  852
Name:  ? Carub.0006s0852 Secondary Identifier:  ? PAC:39249042
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s0852 0.5kb upstream 0.5kb upstream 3151 true scaffold_6: 3090705-3093855 Capsella rubella
Carub.0006s0852 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 3093356-3093855 Capsella rubella
Carub.0006s0852 0.5kb downstream 0.5kb downstream 3151 true scaffold_6: 3090205-3093355 Capsella rubella
Carub.0006s0852 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 3090205-3090704 Capsella rubella
Carub.0006s0852 1.0kb upstream 1.0kb upstream 3651 true scaffold_6: 3090705-3094355 Capsella rubella
Carub.0006s0852 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 3093356-3094355 Capsella rubella
Carub.0006s0852 1.0kb downstream 1.0kb downstream 3651 true scaffold_6: 3089705-3093355 Capsella rubella
Carub.0006s0852 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 3089705-3090704 Capsella rubella
Carub.0006s0852 2.0kb upstream 2.0kb upstream 4651 true scaffold_6: 3090705-3095355 Capsella rubella
Carub.0006s0852 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 3093356-3095355 Capsella rubella
Carub.0006s0852 2.0kb downstream 2.0kb downstream 4651 true scaffold_6: 3088705-3093355 Capsella rubella
Carub.0006s0852 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 3088705-3090704 Capsella rubella
Carub.0006s0852 5.0kb upstream 5.0kb upstream 7651 true scaffold_6: 3090705-3098355 Capsella rubella
Carub.0006s0852 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 3093356-3098355 Capsella rubella
Carub.0006s0852 5.0kb downstream 5.0kb downstream 7651 true scaffold_6: 3085705-3093355 Capsella rubella
Carub.0006s0852 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 3085705-3090704 Capsella rubella
Carub.0006s0852 10.0kb upstream 10.0kb upstream 12651 true scaffold_6: 3090705-3103355 Capsella rubella
Carub.0006s0852 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 3093356-3103355 Capsella rubella
Carub.0006s0852 10.0kb downstream 10.0kb downstream 12651 true scaffold_6: 3080705-3093355 Capsella rubella
Carub.0006s0852 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 3080705-3090704 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369692 5261 Brassicaceae View MSA
123840153 5264 Brassicales-Malvales View MSA
124344204 5266 SBM View MSA
124251987 5268 Malvidae View MSA
124070749 5270 Rosid View MSA
123742286 5271 Pentapetalae View MSA
122795416 5272 Eudicot View MSA
122049571 5273 Angiosperm View MSA
123428880 5275 Viridiplantae View MSA
121348039 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain