Gene : Carub.0008s0344 C. rubella v1.1
Defline:  (1 of 9) PTHR24015//PTHR24015:SF419 - FAMILY NOT NAMED // NUCLEOTIDE-DIPHOSPHO-SUGAR TRANSFERASE DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  344
Name:  ? Carub.0008s0344 Secondary Identifier:  ? PAC:39251250
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s0344 0.5kb upstream 0.5kb upstream 2562 true scaffold_8: 1420441-1423002 Capsella rubella
Carub.0008s0344 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 1420441-1420940 Capsella rubella
Carub.0008s0344 0.5kb downstream 0.5kb downstream 2562 true scaffold_8: 1420941-1423502 Capsella rubella
Carub.0008s0344 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 1423003-1423502 Capsella rubella
Carub.0008s0344 1.0kb upstream 1.0kb upstream 3062 true scaffold_8: 1419941-1423002 Capsella rubella
Carub.0008s0344 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 1419941-1420940 Capsella rubella
Carub.0008s0344 1.0kb downstream 1.0kb downstream 3062 true scaffold_8: 1420941-1424002 Capsella rubella
Carub.0008s0344 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 1423003-1424002 Capsella rubella
Carub.0008s0344 2.0kb upstream 2.0kb upstream 4062 true scaffold_8: 1418941-1423002 Capsella rubella
Carub.0008s0344 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 1418941-1420940 Capsella rubella
Carub.0008s0344 2.0kb downstream 2.0kb downstream 4062 true scaffold_8: 1420941-1425002 Capsella rubella
Carub.0008s0344 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 1423003-1425002 Capsella rubella
Carub.0008s0344 5.0kb upstream 5.0kb upstream 7062 true scaffold_8: 1415941-1423002 Capsella rubella
Carub.0008s0344 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 1415941-1420940 Capsella rubella
Carub.0008s0344 5.0kb downstream 5.0kb downstream 7062 true scaffold_8: 1420941-1428002 Capsella rubella
Carub.0008s0344 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 1423003-1428002 Capsella rubella
Carub.0008s0344 10.0kb upstream 10.0kb upstream 12062 true scaffold_8: 1410941-1423002 Capsella rubella
Carub.0008s0344 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 1410941-1420940 Capsella rubella
Carub.0008s0344 10.0kb downstream 10.0kb downstream 12062 true scaffold_8: 1420941-1433002 Capsella rubella
Carub.0008s0344 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 1423003-1433002 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365328 5261 Brassicaceae View MSA
123798931 5264 Brassicales-Malvales View MSA
124296503 5266 SBM View MSA
124148635 5268 Malvidae View MSA
124072504 5270 Rosid View MSA
123743110 5271 Pentapetalae View MSA
122789265 5272 Eudicot View MSA
122042337 5273 Angiosperm View MSA
121347291 5274 Embryophyte View MSA
123428374 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain