Gene : Carub.0006s0885 C. rubella v1.1
Defline:  (1 of 3) PTHR14155//PTHR14155:SF94 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL33-RELATED Genomic Order:  885
Name:  ? Carub.0006s0885 Secondary Identifier:  ? PAC:39249020
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s0885 0.5kb upstream 0.5kb upstream 1900 true scaffold_6: 3205233-3207132 Capsella rubella
Carub.0006s0885 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 3205233-3205732 Capsella rubella
Carub.0006s0885 0.5kb downstream 0.5kb downstream 1900 true scaffold_6: 3205733-3207632 Capsella rubella
Carub.0006s0885 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 3207133-3207632 Capsella rubella
Carub.0006s0885 1.0kb upstream 1.0kb upstream 2400 true scaffold_6: 3204733-3207132 Capsella rubella
Carub.0006s0885 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 3204733-3205732 Capsella rubella
Carub.0006s0885 1.0kb downstream 1.0kb downstream 2400 true scaffold_6: 3205733-3208132 Capsella rubella
Carub.0006s0885 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 3207133-3208132 Capsella rubella
Carub.0006s0885 2.0kb upstream 2.0kb upstream 3400 true scaffold_6: 3203733-3207132 Capsella rubella
Carub.0006s0885 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 3203733-3205732 Capsella rubella
Carub.0006s0885 2.0kb downstream 2.0kb downstream 3400 true scaffold_6: 3205733-3209132 Capsella rubella
Carub.0006s0885 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 3207133-3209132 Capsella rubella
Carub.0006s0885 5.0kb upstream 5.0kb upstream 6400 true scaffold_6: 3200733-3207132 Capsella rubella
Carub.0006s0885 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 3200733-3205732 Capsella rubella
Carub.0006s0885 5.0kb downstream 5.0kb downstream 6400 true scaffold_6: 3205733-3212132 Capsella rubella
Carub.0006s0885 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 3207133-3212132 Capsella rubella
Carub.0006s0885 10.0kb upstream 10.0kb upstream 11400 true scaffold_6: 3195733-3207132 Capsella rubella
Carub.0006s0885 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 3195733-3205732 Capsella rubella
Carub.0006s0885 10.0kb downstream 10.0kb downstream 11400 true scaffold_6: 3205733-3217132 Capsella rubella
Carub.0006s0885 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 3207133-3217132 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365468 5261 Brassicaceae View MSA
123798963 5264 Brassicales-Malvales View MSA
124296535 5266 SBM View MSA
124252904 5268 Malvidae View MSA
124071725 5270 Rosid View MSA
123745197 5271 Pentapetalae View MSA
122794608 5272 Eudicot View MSA
122048508 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain