Gene : Carub.0008s0213 C. rubella v1.1
Defline:  (1 of 3) PTHR22952//PTHR22952:SF210 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED // DOG1 ALPHA SPLICE VARIANT Genomic Order:  213
Name:  ? Carub.0008s0213 Secondary Identifier:  ? PAC:39252113
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s0213 0.5kb upstream 0.5kb upstream 1714 true scaffold_8: 831442-833155 Capsella rubella
Carub.0008s0213 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 831442-831941 Capsella rubella
Carub.0008s0213 0.5kb downstream 0.5kb downstream 1714 true scaffold_8: 831942-833655 Capsella rubella
Carub.0008s0213 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 833156-833655 Capsella rubella
Carub.0008s0213 1.0kb upstream 1.0kb upstream 2214 true scaffold_8: 830942-833155 Capsella rubella
Carub.0008s0213 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 830942-831941 Capsella rubella
Carub.0008s0213 1.0kb downstream 1.0kb downstream 2214 true scaffold_8: 831942-834155 Capsella rubella
Carub.0008s0213 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 833156-834155 Capsella rubella
Carub.0008s0213 2.0kb upstream 2.0kb upstream 3214 true scaffold_8: 829942-833155 Capsella rubella
Carub.0008s0213 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 829942-831941 Capsella rubella
Carub.0008s0213 2.0kb downstream 2.0kb downstream 3214 true scaffold_8: 831942-835155 Capsella rubella
Carub.0008s0213 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 833156-835155 Capsella rubella
Carub.0008s0213 5.0kb upstream 5.0kb upstream 6214 true scaffold_8: 826942-833155 Capsella rubella
Carub.0008s0213 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 826942-831941 Capsella rubella
Carub.0008s0213 5.0kb downstream 5.0kb downstream 6214 true scaffold_8: 831942-838155 Capsella rubella
Carub.0008s0213 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 833156-838155 Capsella rubella
Carub.0008s0213 10.0kb upstream 10.0kb upstream 11214 true scaffold_8: 821942-833155 Capsella rubella
Carub.0008s0213 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 821942-831941 Capsella rubella
Carub.0008s0213 10.0kb downstream 10.0kb downstream 11214 true scaffold_8: 831942-843155 Capsella rubella
Carub.0008s0213 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 833156-843155 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364056 5261 Brassicaceae View MSA
123835440 5264 Brassicales-Malvales View MSA
124322052 5266 SBM View MSA
124250601 5268 Malvidae View MSA
124070916 5270 Rosid View MSA
123746178 5271 Pentapetalae View MSA
122797836 5272 Eudicot View MSA
122044806 5273 Angiosperm View MSA
121350176 5274 Embryophyte View MSA
123381607 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain