Gene : Carub.0006s0894 C. rubella v1.1
Defline:  (1 of 1) 3.1.3.3//3.1.3.74 - Phosphoserine phosphatase // Pyridoxal phosphatase / Vitamin B6-phosphate phosphatase Genomic Order:  894
Name:  ? Carub.0006s0894 Secondary Identifier:  ? PAC:39248838
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-7204 Capsella rubella pathologic  
Crubella SER-GLYSYN-PWY Capsella rubella pathologic  
Crubella SERSYN-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s0894 0.5kb upstream 0.5kb upstream 2604 true scaffold_6: 3231804-3234407 Capsella rubella
Carub.0006s0894 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 3231804-3232303 Capsella rubella
Carub.0006s0894 0.5kb downstream 0.5kb downstream 2604 true scaffold_6: 3232304-3234907 Capsella rubella
Carub.0006s0894 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 3234408-3234907 Capsella rubella
Carub.0006s0894 1.0kb upstream 1.0kb upstream 3104 true scaffold_6: 3231304-3234407 Capsella rubella
Carub.0006s0894 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 3231304-3232303 Capsella rubella
Carub.0006s0894 1.0kb downstream 1.0kb downstream 3104 true scaffold_6: 3232304-3235407 Capsella rubella
Carub.0006s0894 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 3234408-3235407 Capsella rubella
Carub.0006s0894 2.0kb upstream 2.0kb upstream 4104 true scaffold_6: 3230304-3234407 Capsella rubella
Carub.0006s0894 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 3230304-3232303 Capsella rubella
Carub.0006s0894 2.0kb downstream 2.0kb downstream 4104 true scaffold_6: 3232304-3236407 Capsella rubella
Carub.0006s0894 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 3234408-3236407 Capsella rubella
Carub.0006s0894 5.0kb upstream 5.0kb upstream 7104 true scaffold_6: 3227304-3234407 Capsella rubella
Carub.0006s0894 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 3227304-3232303 Capsella rubella
Carub.0006s0894 5.0kb downstream 5.0kb downstream 7104 true scaffold_6: 3232304-3239407 Capsella rubella
Carub.0006s0894 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 3234408-3239407 Capsella rubella
Carub.0006s0894 10.0kb upstream 10.0kb upstream 12104 true scaffold_6: 3222304-3234407 Capsella rubella
Carub.0006s0894 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 3222304-3232303 Capsella rubella
Carub.0006s0894 10.0kb downstream 10.0kb downstream 12104 true scaffold_6: 3232304-3244407 Capsella rubella
Carub.0006s0894 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 3234408-3244407 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371701 5261 Brassicaceae View MSA
123830460 5264 Brassicales-Malvales View MSA
124339444 5266 SBM View MSA
124238996 5268 Malvidae View MSA
124065933 5270 Rosid View MSA
123748691 5271 Pentapetalae View MSA
122789979 5272 Eudicot View MSA
122045507 5273 Angiosperm View MSA
121310456 5274 Embryophyte View MSA
123425342 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain