Gene : Carub.0008s0008 C. rubella v1.1
Defline:  (1 of 4) K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) Genomic Order:  8
Name:  ? Carub.0008s0008 Secondary Identifier:  ? PAC:39251482
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s0008 0.5kb upstream 0.5kb upstream 1700 true scaffold_8: 22014-23713 Capsella rubella
Carub.0008s0008 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 22014-22513 Capsella rubella
Carub.0008s0008 0.5kb downstream 0.5kb downstream 1700 true scaffold_8: 22514-24213 Capsella rubella
Carub.0008s0008 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 23714-24213 Capsella rubella
Carub.0008s0008 1.0kb upstream 1.0kb upstream 2200 true scaffold_8: 21514-23713 Capsella rubella
Carub.0008s0008 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 21514-22513 Capsella rubella
Carub.0008s0008 1.0kb downstream 1.0kb downstream 2200 true scaffold_8: 22514-24713 Capsella rubella
Carub.0008s0008 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 23714-24713 Capsella rubella
Carub.0008s0008 2.0kb upstream 2.0kb upstream 3200 true scaffold_8: 20514-23713 Capsella rubella
Carub.0008s0008 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 20514-22513 Capsella rubella
Carub.0008s0008 2.0kb downstream 2.0kb downstream 3200 true scaffold_8: 22514-25713 Capsella rubella
Carub.0008s0008 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 23714-25713 Capsella rubella
Carub.0008s0008 5.0kb upstream 5.0kb upstream 6200 true scaffold_8: 17514-23713 Capsella rubella
Carub.0008s0008 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 17514-22513 Capsella rubella
Carub.0008s0008 5.0kb downstream 5.0kb downstream 6200 true scaffold_8: 22514-28713 Capsella rubella
Carub.0008s0008 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 23714-28713 Capsella rubella
Carub.0008s0008 10.0kb upstream 10.0kb upstream 11200 true scaffold_8: 12514-23713 Capsella rubella
Carub.0008s0008 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 12514-22513 Capsella rubella
Carub.0008s0008 10.0kb downstream 10.0kb downstream 11200 true scaffold_8: 22514-33713 Capsella rubella
Carub.0008s0008 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 23714-33713 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380631 5261 Brassicaceae View MSA
123840228 5264 Brassicales-Malvales View MSA
124346847 5266 SBM View MSA
124250249 5268 Malvidae View MSA
124074239 5270 Rosid View MSA
123751356 5271 Pentapetalae View MSA
122787708 5272 Eudicot View MSA
122049908 5273 Angiosperm View MSA
121345630 5274 Embryophyte View MSA
123424644 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain