Gene : Carub.0008s0023 C. rubella v1.1

Defline:  (1 of 8) PTHR11413 - CYSTATIN FAMILY MEMBER Genomic Order:  23
Name:  ? Carub.0008s0023 Secondary Identifier:  ? PAC:39250435

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s0023 0.5kb upstream 0.5kb upstream 1529 true scaffold_8: 64478-66006 Capsella rubella
Carub.0008s0023 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 64478-64977 Capsella rubella
Carub.0008s0023 0.5kb downstream 0.5kb downstream 1529 true scaffold_8: 64978-66506 Capsella rubella
Carub.0008s0023 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 66007-66506 Capsella rubella
Carub.0008s0023 1.0kb upstream 1.0kb upstream 2029 true scaffold_8: 63978-66006 Capsella rubella
Carub.0008s0023 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 63978-64977 Capsella rubella
Carub.0008s0023 1.0kb downstream 1.0kb downstream 2029 true scaffold_8: 64978-67006 Capsella rubella
Carub.0008s0023 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 66007-67006 Capsella rubella
Carub.0008s0023 2.0kb upstream 2.0kb upstream 3029 true scaffold_8: 62978-66006 Capsella rubella
Carub.0008s0023 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 62978-64977 Capsella rubella
Carub.0008s0023 2.0kb downstream 2.0kb downstream 3029 true scaffold_8: 64978-68006 Capsella rubella
Carub.0008s0023 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 66007-68006 Capsella rubella
Carub.0008s0023 5.0kb upstream 5.0kb upstream 6029 true scaffold_8: 59978-66006 Capsella rubella
Carub.0008s0023 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 59978-64977 Capsella rubella
Carub.0008s0023 5.0kb downstream 5.0kb downstream 6029 true scaffold_8: 64978-71006 Capsella rubella
Carub.0008s0023 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 66007-71006 Capsella rubella
Carub.0008s0023 10.0kb upstream 10.0kb upstream 11029 true scaffold_8: 54978-66006 Capsella rubella
Carub.0008s0023 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 54978-64977 Capsella rubella
Carub.0008s0023 10.0kb downstream 10.0kb downstream 11029 true scaffold_8: 64978-76006 Capsella rubella
Carub.0008s0023 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 66007-76006 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378748 5261 Brassicaceae View MSA
123833578 5264 Brassicales-Malvales View MSA
124341533 5266 SBM View MSA
124239558 5268 Malvidae View MSA
124072970 5270 Rosid View MSA
123747344 5271 Pentapetalae View MSA
122796590 5272 Eudicot View MSA
122051666 5273 Angiosperm View MSA
121351690 5274 Embryophyte View MSA
123426487 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain