Gene : Carub.0008s0133 C. rubella v1.1
Defline:  (1 of 176) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  133
Name:  ? Carub.0008s0133 Secondary Identifier:  ? PAC:39251275
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s0133 0.5kb upstream 0.5kb upstream 2789 true scaffold_8: 506765-509553 Capsella rubella
Carub.0008s0133 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 506765-507264 Capsella rubella
Carub.0008s0133 0.5kb downstream 0.5kb downstream 2789 true scaffold_8: 507265-510053 Capsella rubella
Carub.0008s0133 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 509554-510053 Capsella rubella
Carub.0008s0133 1.0kb upstream 1.0kb upstream 3289 true scaffold_8: 506265-509553 Capsella rubella
Carub.0008s0133 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 506265-507264 Capsella rubella
Carub.0008s0133 1.0kb downstream 1.0kb downstream 3289 true scaffold_8: 507265-510553 Capsella rubella
Carub.0008s0133 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 509554-510553 Capsella rubella
Carub.0008s0133 2.0kb upstream 2.0kb upstream 4289 true scaffold_8: 505265-509553 Capsella rubella
Carub.0008s0133 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 505265-507264 Capsella rubella
Carub.0008s0133 2.0kb downstream 2.0kb downstream 4289 true scaffold_8: 507265-511553 Capsella rubella
Carub.0008s0133 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 509554-511553 Capsella rubella
Carub.0008s0133 5.0kb upstream 5.0kb upstream 7289 true scaffold_8: 502265-509553 Capsella rubella
Carub.0008s0133 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 502265-507264 Capsella rubella
Carub.0008s0133 5.0kb downstream 5.0kb downstream 7289 true scaffold_8: 507265-514553 Capsella rubella
Carub.0008s0133 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 509554-514553 Capsella rubella
Carub.0008s0133 10.0kb upstream 10.0kb upstream 12289 true scaffold_8: 497265-509553 Capsella rubella
Carub.0008s0133 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 497265-507264 Capsella rubella
Carub.0008s0133 10.0kb downstream 10.0kb downstream 12289 true scaffold_8: 507265-519553 Capsella rubella
Carub.0008s0133 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 509554-519553 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377627 5261 Brassicaceae View MSA
123832249 5264 Brassicales-Malvales View MSA
124343694 5266 SBM View MSA
124241884 5268 Malvidae View MSA
124065827 5270 Rosid View MSA
123753301 5271 Pentapetalae View MSA
122789942 5272 Eudicot View MSA
122043539 5273 Angiosperm View MSA
121344903 5274 Embryophyte View MSA
123380125 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain