Gene : Carub.0008s0127 C. rubella v1.1
Defline:  (1 of 2) PTHR31500//PTHR31500:SF17 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN Genomic Order:  127
Name:  ? Carub.0008s0127 Secondary Identifier:  ? PAC:39251394
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s0127 0.5kb upstream 0.5kb upstream 2648 true scaffold_8: 475964-478611 Capsella rubella
Carub.0008s0127 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 478112-478611 Capsella rubella
Carub.0008s0127 0.5kb downstream 0.5kb downstream 2648 true scaffold_8: 475464-478111 Capsella rubella
Carub.0008s0127 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 475464-475963 Capsella rubella
Carub.0008s0127 1.0kb upstream 1.0kb upstream 3148 true scaffold_8: 475964-479111 Capsella rubella
Carub.0008s0127 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 478112-479111 Capsella rubella
Carub.0008s0127 1.0kb downstream 1.0kb downstream 3148 true scaffold_8: 474964-478111 Capsella rubella
Carub.0008s0127 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 474964-475963 Capsella rubella
Carub.0008s0127 2.0kb upstream 2.0kb upstream 4148 true scaffold_8: 475964-480111 Capsella rubella
Carub.0008s0127 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 478112-480111 Capsella rubella
Carub.0008s0127 2.0kb downstream 2.0kb downstream 4148 true scaffold_8: 473964-478111 Capsella rubella
Carub.0008s0127 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 473964-475963 Capsella rubella
Carub.0008s0127 5.0kb upstream 5.0kb upstream 7148 true scaffold_8: 475964-483111 Capsella rubella
Carub.0008s0127 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 478112-483111 Capsella rubella
Carub.0008s0127 5.0kb downstream 5.0kb downstream 7148 true scaffold_8: 470964-478111 Capsella rubella
Carub.0008s0127 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 470964-475963 Capsella rubella
Carub.0008s0127 10.0kb upstream 10.0kb upstream 12148 true scaffold_8: 475964-488111 Capsella rubella
Carub.0008s0127 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 478112-488111 Capsella rubella
Carub.0008s0127 10.0kb downstream 10.0kb downstream 12148 true scaffold_8: 465964-478111 Capsella rubella
Carub.0008s0127 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 465964-475963 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376639 5261 Brassicaceae View MSA
123801316 5264 Brassicales-Malvales View MSA
124346948 5266 SBM View MSA
124250687 5268 Malvidae View MSA
124064410 5270 Rosid View MSA
123753724 5271 Pentapetalae View MSA
122796118 5272 Eudicot View MSA
122049850 5273 Angiosperm View MSA
121348420 5274 Embryophyte View MSA
123380859 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain