Gene : Carub.0002s0494 C. rubella v1.1
Defline:  (1 of 3) PTHR31458//PTHR31458:SF3 - FAMILY NOT NAMED // POLYGALACTURONASE NON-CATALYTIC SUBUNIT JP630-RELATED Genomic Order:  494
Name:  ? Carub.0002s0494 Secondary Identifier:  ? PAC:39244102
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s0494 0.5kb upstream 0.5kb upstream 2542 true scaffold_2: 2040883-2043424 Capsella rubella
Carub.0002s0494 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 2040883-2041382 Capsella rubella
Carub.0002s0494 0.5kb downstream 0.5kb downstream 2542 true scaffold_2: 2041383-2043924 Capsella rubella
Carub.0002s0494 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 2043425-2043924 Capsella rubella
Carub.0002s0494 1.0kb upstream 1.0kb upstream 3042 true scaffold_2: 2040383-2043424 Capsella rubella
Carub.0002s0494 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 2040383-2041382 Capsella rubella
Carub.0002s0494 1.0kb downstream 1.0kb downstream 3042 true scaffold_2: 2041383-2044424 Capsella rubella
Carub.0002s0494 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 2043425-2044424 Capsella rubella
Carub.0002s0494 2.0kb upstream 2.0kb upstream 4042 true scaffold_2: 2039383-2043424 Capsella rubella
Carub.0002s0494 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 2039383-2041382 Capsella rubella
Carub.0002s0494 2.0kb downstream 2.0kb downstream 4042 true scaffold_2: 2041383-2045424 Capsella rubella
Carub.0002s0494 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 2043425-2045424 Capsella rubella
Carub.0002s0494 5.0kb upstream 5.0kb upstream 7042 true scaffold_2: 2036383-2043424 Capsella rubella
Carub.0002s0494 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 2036383-2041382 Capsella rubella
Carub.0002s0494 5.0kb downstream 5.0kb downstream 7042 true scaffold_2: 2041383-2048424 Capsella rubella
Carub.0002s0494 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 2043425-2048424 Capsella rubella
Carub.0002s0494 10.0kb upstream 10.0kb upstream 12042 true scaffold_2: 2031383-2043424 Capsella rubella
Carub.0002s0494 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 2031383-2041382 Capsella rubella
Carub.0002s0494 10.0kb downstream 10.0kb downstream 12042 true scaffold_2: 2041383-2053424 Capsella rubella
Carub.0002s0494 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 2043425-2053424 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372157 5261 Brassicaceae View MSA
123840540 5264 Brassicales-Malvales View MSA
124322738 5266 SBM View MSA
124169209 5268 Malvidae View MSA
124060515 5270 Rosid View MSA
123747690 5271 Pentapetalae View MSA
122795038 5272 Eudicot View MSA
122050223 5273 Angiosperm View MSA
121351029 5274 Embryophyte View MSA
123381981 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain