Gene : Carub.0002s0066 C. rubella v1.1
Defline:  (1 of 1) PTHR12608//PTHR12608:SF6 - TRANSMEMBRANE PROTEIN HTP-1 RELATED // GDT1-LIKE PROTEIN 1, CHLOROPLASTIC Genomic Order:  66
Name:  ? Carub.0002s0066 Secondary Identifier:  ? PAC:39244610
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s0066 0.5kb upstream 0.5kb upstream 4369 true scaffold_2: 274418-278786 Capsella rubella
Carub.0002s0066 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 274418-274917 Capsella rubella
Carub.0002s0066 0.5kb downstream 0.5kb downstream 4369 true scaffold_2: 274918-279286 Capsella rubella
Carub.0002s0066 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 278787-279286 Capsella rubella
Carub.0002s0066 1.0kb upstream 1.0kb upstream 4869 true scaffold_2: 273918-278786 Capsella rubella
Carub.0002s0066 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 273918-274917 Capsella rubella
Carub.0002s0066 1.0kb downstream 1.0kb downstream 4869 true scaffold_2: 274918-279786 Capsella rubella
Carub.0002s0066 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 278787-279786 Capsella rubella
Carub.0002s0066 2.0kb upstream 2.0kb upstream 5869 true scaffold_2: 272918-278786 Capsella rubella
Carub.0002s0066 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 272918-274917 Capsella rubella
Carub.0002s0066 2.0kb downstream 2.0kb downstream 5869 true scaffold_2: 274918-280786 Capsella rubella
Carub.0002s0066 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 278787-280786 Capsella rubella
Carub.0002s0066 5.0kb upstream 5.0kb upstream 8869 true scaffold_2: 269918-278786 Capsella rubella
Carub.0002s0066 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 269918-274917 Capsella rubella
Carub.0002s0066 5.0kb downstream 5.0kb downstream 8869 true scaffold_2: 274918-283786 Capsella rubella
Carub.0002s0066 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 278787-283786 Capsella rubella
Carub.0002s0066 10.0kb upstream 10.0kb upstream 13869 true scaffold_2: 264918-278786 Capsella rubella
Carub.0002s0066 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 264918-274917 Capsella rubella
Carub.0002s0066 10.0kb downstream 10.0kb downstream 13869 true scaffold_2: 274918-288786 Capsella rubella
Carub.0002s0066 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 278787-288786 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361574 5261 Brassicaceae View MSA
123828926 5264 Brassicales-Malvales View MSA
124338050 5266 SBM View MSA
124240760 5268 Malvidae View MSA
124063864 5270 Rosid View MSA
123737377 5271 Pentapetalae View MSA
122788371 5272 Eudicot View MSA
122045430 5273 Angiosperm View MSA
121344510 5274 Embryophyte View MSA
123428056 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain