Gene : Carub.0006s1162 C. rubella v1.1
Defline:  (1 of 1) PTHR32295:SF35 - PROTEIN IQ-DOMAIN 11 Genomic Order:  1162
Name:  ? Carub.0006s1162 Secondary Identifier:  ? PAC:39246079
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1162 0.5kb upstream 0.5kb upstream 3259 true scaffold_6: 4309908-4313166 Capsella rubella
Carub.0006s1162 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 4309908-4310407 Capsella rubella
Carub.0006s1162 0.5kb downstream 0.5kb downstream 3259 true scaffold_6: 4310408-4313666 Capsella rubella
Carub.0006s1162 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 4313167-4313666 Capsella rubella
Carub.0006s1162 1.0kb upstream 1.0kb upstream 3759 true scaffold_6: 4309408-4313166 Capsella rubella
Carub.0006s1162 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 4309408-4310407 Capsella rubella
Carub.0006s1162 1.0kb downstream 1.0kb downstream 3759 true scaffold_6: 4310408-4314166 Capsella rubella
Carub.0006s1162 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 4313167-4314166 Capsella rubella
Carub.0006s1162 2.0kb upstream 2.0kb upstream 4759 true scaffold_6: 4308408-4313166 Capsella rubella
Carub.0006s1162 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 4308408-4310407 Capsella rubella
Carub.0006s1162 2.0kb downstream 2.0kb downstream 4759 true scaffold_6: 4310408-4315166 Capsella rubella
Carub.0006s1162 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 4313167-4315166 Capsella rubella
Carub.0006s1162 5.0kb upstream 5.0kb upstream 7759 true scaffold_6: 4305408-4313166 Capsella rubella
Carub.0006s1162 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 4305408-4310407 Capsella rubella
Carub.0006s1162 5.0kb downstream 5.0kb downstream 7759 true scaffold_6: 4310408-4318166 Capsella rubella
Carub.0006s1162 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 4313167-4318166 Capsella rubella
Carub.0006s1162 10.0kb upstream 10.0kb upstream 12759 true scaffold_6: 4300408-4313166 Capsella rubella
Carub.0006s1162 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 4300408-4310407 Capsella rubella
Carub.0006s1162 10.0kb downstream 10.0kb downstream 12759 true scaffold_6: 4310408-4323166 Capsella rubella
Carub.0006s1162 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 4313167-4323166 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366526 5261 Brassicaceae View MSA
123834501 5264 Brassicales-Malvales View MSA
124345092 5266 SBM View MSA
124239176 5268 Malvidae View MSA
124062975 5270 Rosid View MSA
123737265 5271 Pentapetalae View MSA
122794904 5272 Eudicot View MSA
122049723 5273 Angiosperm View MSA
121311558 5274 Embryophyte View MSA
123348838 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain