Gene : Carub.0002s0133 C. rubella v1.1
Genomic Order:  133 Name:  ? Carub.0002s0133
Secondary Identifier:  ? PAC:39244898
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s0133 0.5kb upstream 0.5kb upstream 3181 true scaffold_2: 539031-542211 Capsella rubella
Carub.0002s0133 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 541712-542211 Capsella rubella
Carub.0002s0133 0.5kb downstream 0.5kb downstream 3181 true scaffold_2: 538531-541711 Capsella rubella
Carub.0002s0133 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 538531-539030 Capsella rubella
Carub.0002s0133 1.0kb upstream 1.0kb upstream 3681 true scaffold_2: 539031-542711 Capsella rubella
Carub.0002s0133 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 541712-542711 Capsella rubella
Carub.0002s0133 1.0kb downstream 1.0kb downstream 3681 true scaffold_2: 538031-541711 Capsella rubella
Carub.0002s0133 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 538031-539030 Capsella rubella
Carub.0002s0133 2.0kb upstream 2.0kb upstream 4681 true scaffold_2: 539031-543711 Capsella rubella
Carub.0002s0133 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 541712-543711 Capsella rubella
Carub.0002s0133 2.0kb downstream 2.0kb downstream 4681 true scaffold_2: 537031-541711 Capsella rubella
Carub.0002s0133 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 537031-539030 Capsella rubella
Carub.0002s0133 5.0kb upstream 5.0kb upstream 7681 true scaffold_2: 539031-546711 Capsella rubella
Carub.0002s0133 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 541712-546711 Capsella rubella
Carub.0002s0133 5.0kb downstream 5.0kb downstream 7681 true scaffold_2: 534031-541711 Capsella rubella
Carub.0002s0133 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 534031-539030 Capsella rubella
Carub.0002s0133 10.0kb upstream 10.0kb upstream 12681 true scaffold_2: 539031-551711 Capsella rubella
Carub.0002s0133 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 541712-551711 Capsella rubella
Carub.0002s0133 10.0kb downstream 10.0kb downstream 12681 true scaffold_2: 529031-541711 Capsella rubella
Carub.0002s0133 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 529031-539030 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122336467 5261 Brassicaceae Singleton cluster - no MSA
123777182 5264 Brassicales-Malvales Singleton cluster - no MSA
124275554 5266 SBM Singleton cluster - no MSA
124130919 5268 Malvidae Singleton cluster - no MSA
123859347 5270 Rosid Singleton cluster - no MSA
123752592 5271 Pentapetalae View MSA
122797875 5272 Eudicot View MSA
122041710 5273 Angiosperm View MSA
121349617 5274 Embryophyte View MSA
123427472 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain