Gene : Carub.0002s0204 C. rubella v1.1
Defline:  (1 of 6) PTHR13935//PTHR13935:SF54 - ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED // TRANSCRIPTION FACTOR BHLH118-RELATED Genomic Order:  204
Name:  ? Carub.0002s0204 Secondary Identifier:  ? PAC:39245541
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s0204 0.5kb upstream 0.5kb upstream 1920 true scaffold_2: 841743-843662 Capsella rubella
Carub.0002s0204 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 843163-843662 Capsella rubella
Carub.0002s0204 0.5kb downstream 0.5kb downstream 1920 true scaffold_2: 841243-843162 Capsella rubella
Carub.0002s0204 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 841243-841742 Capsella rubella
Carub.0002s0204 1.0kb upstream 1.0kb upstream 2420 true scaffold_2: 841743-844162 Capsella rubella
Carub.0002s0204 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 843163-844162 Capsella rubella
Carub.0002s0204 1.0kb downstream 1.0kb downstream 2420 true scaffold_2: 840743-843162 Capsella rubella
Carub.0002s0204 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 840743-841742 Capsella rubella
Carub.0002s0204 2.0kb upstream 2.0kb upstream 3420 true scaffold_2: 841743-845162 Capsella rubella
Carub.0002s0204 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 843163-845162 Capsella rubella
Carub.0002s0204 2.0kb downstream 2.0kb downstream 3420 true scaffold_2: 839743-843162 Capsella rubella
Carub.0002s0204 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 839743-841742 Capsella rubella
Carub.0002s0204 5.0kb upstream 5.0kb upstream 6420 true scaffold_2: 841743-848162 Capsella rubella
Carub.0002s0204 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 843163-848162 Capsella rubella
Carub.0002s0204 5.0kb downstream 5.0kb downstream 6420 true scaffold_2: 836743-843162 Capsella rubella
Carub.0002s0204 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 836743-841742 Capsella rubella
Carub.0002s0204 10.0kb upstream 10.0kb upstream 11420 true scaffold_2: 841743-853162 Capsella rubella
Carub.0002s0204 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 843163-853162 Capsella rubella
Carub.0002s0204 10.0kb downstream 10.0kb downstream 11420 true scaffold_2: 831743-843162 Capsella rubella
Carub.0002s0204 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 831743-841742 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364193 5261 Brassicaceae View MSA
123798707 5264 Brassicales-Malvales View MSA
124296311 5266 SBM View MSA
124249323 5268 Malvidae View MSA
124073139 5270 Rosid View MSA
123750941 5271 Pentapetalae View MSA
122792125 5272 Eudicot View MSA
122050150 5273 Angiosperm View MSA
121311764 5274 Embryophyte View MSA
123349017 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain