Gene : Carub.0002s0418 C. rubella v1.1
Defline:  (1 of 1) K14403 - cleavage and polyadenylation specificity factor subunit 3 (CPSF3, YSH1) Genomic Order:  418
Name:  ? Carub.0002s0418 Secondary Identifier:  ? PAC:39245008
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s0418 0.5kb upstream 0.5kb upstream 3351 true scaffold_2: 1768178-1771528 Capsella rubella
Carub.0002s0418 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 1768178-1768677 Capsella rubella
Carub.0002s0418 0.5kb downstream 0.5kb downstream 3351 true scaffold_2: 1768678-1772028 Capsella rubella
Carub.0002s0418 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 1771529-1772028 Capsella rubella
Carub.0002s0418 1.0kb upstream 1.0kb upstream 3851 true scaffold_2: 1767678-1771528 Capsella rubella
Carub.0002s0418 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 1767678-1768677 Capsella rubella
Carub.0002s0418 1.0kb downstream 1.0kb downstream 3851 true scaffold_2: 1768678-1772528 Capsella rubella
Carub.0002s0418 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 1771529-1772528 Capsella rubella
Carub.0002s0418 2.0kb upstream 2.0kb upstream 4851 true scaffold_2: 1766678-1771528 Capsella rubella
Carub.0002s0418 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 1766678-1768677 Capsella rubella
Carub.0002s0418 2.0kb downstream 2.0kb downstream 4851 true scaffold_2: 1768678-1773528 Capsella rubella
Carub.0002s0418 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 1771529-1773528 Capsella rubella
Carub.0002s0418 5.0kb upstream 5.0kb upstream 7851 true scaffold_2: 1763678-1771528 Capsella rubella
Carub.0002s0418 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 1763678-1768677 Capsella rubella
Carub.0002s0418 5.0kb downstream 5.0kb downstream 7851 true scaffold_2: 1768678-1776528 Capsella rubella
Carub.0002s0418 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 1771529-1776528 Capsella rubella
Carub.0002s0418 10.0kb upstream 10.0kb upstream 12851 true scaffold_2: 1758678-1771528 Capsella rubella
Carub.0002s0418 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 1758678-1768677 Capsella rubella
Carub.0002s0418 10.0kb downstream 10.0kb downstream 12851 true scaffold_2: 1768678-1781528 Capsella rubella
Carub.0002s0418 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 1771529-1781528 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362819 5261 Brassicaceae View MSA
123834506 5264 Brassicales-Malvales View MSA
124339340 5266 SBM View MSA
124240233 5268 Malvidae View MSA
124069144 5270 Rosid View MSA
123737770 5271 Pentapetalae View MSA
122787624 5272 Eudicot View MSA
122043223 5273 Angiosperm View MSA
121344994 5274 Embryophyte View MSA
123426215 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain