Gene : Carub.0002s0262 C. rubella v1.1
Defline:  (1 of 1) PTHR11850//PTHR11850:SF100 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // HOMEOBOX PROTEIN SHOOT MERISTEMLESS Genomic Order:  262
Name:  ? Carub.0002s0262 Secondary Identifier:  ? PAC:39245917
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s0262 0.5kb upstream 0.5kb upstream 3629 true scaffold_2: 1111500-1115128 Capsella rubella
Carub.0002s0262 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 1111500-1111999 Capsella rubella
Carub.0002s0262 0.5kb downstream 0.5kb downstream 3629 true scaffold_2: 1112000-1115628 Capsella rubella
Carub.0002s0262 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 1115129-1115628 Capsella rubella
Carub.0002s0262 1.0kb upstream 1.0kb upstream 4129 true scaffold_2: 1111000-1115128 Capsella rubella
Carub.0002s0262 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 1111000-1111999 Capsella rubella
Carub.0002s0262 1.0kb downstream 1.0kb downstream 4129 true scaffold_2: 1112000-1116128 Capsella rubella
Carub.0002s0262 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 1115129-1116128 Capsella rubella
Carub.0002s0262 2.0kb upstream 2.0kb upstream 5129 true scaffold_2: 1110000-1115128 Capsella rubella
Carub.0002s0262 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 1110000-1111999 Capsella rubella
Carub.0002s0262 2.0kb downstream 2.0kb downstream 5129 true scaffold_2: 1112000-1117128 Capsella rubella
Carub.0002s0262 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 1115129-1117128 Capsella rubella
Carub.0002s0262 5.0kb upstream 5.0kb upstream 8129 true scaffold_2: 1107000-1115128 Capsella rubella
Carub.0002s0262 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 1107000-1111999 Capsella rubella
Carub.0002s0262 5.0kb downstream 5.0kb downstream 8129 true scaffold_2: 1112000-1120128 Capsella rubella
Carub.0002s0262 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 1115129-1120128 Capsella rubella
Carub.0002s0262 10.0kb upstream 10.0kb upstream 13129 true scaffold_2: 1102000-1115128 Capsella rubella
Carub.0002s0262 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 1102000-1111999 Capsella rubella
Carub.0002s0262 10.0kb downstream 10.0kb downstream 13129 true scaffold_2: 1112000-1125128 Capsella rubella
Carub.0002s0262 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 1115129-1125128 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365536 5261 Brassicaceae View MSA
123831310 5264 Brassicales-Malvales View MSA
124339086 5266 SBM View MSA
124253570 5268 Malvidae View MSA
124072037 5270 Rosid View MSA
123750536 5271 Pentapetalae View MSA
122794934 5272 Eudicot View MSA
122051072 5273 Angiosperm View MSA
121351483 5274 Embryophyte View MSA
123428758 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain