Gene : Carub.0007s3536 C. rubella v1.1
Defline:  (1 of 1) PTHR11373//PTHR11373:SF31 - SAM DOMAIN AND HD DOMAIN-CONTAINING PROTEIN-RELATED // SUBFAMILY NOT NAMED Genomic Order:  3536
Name:  ? Carub.0007s3536 Secondary Identifier:  ? PAC:39235132
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s3536 0.5kb upstream 0.5kb upstream 4358 true scaffold_7: 16153112-16157469 Capsella rubella
Carub.0007s3536 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 16153112-16153611 Capsella rubella
Carub.0007s3536 0.5kb downstream 0.5kb downstream 4358 true scaffold_7: 16153612-16157969 Capsella rubella
Carub.0007s3536 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 16157470-16157969 Capsella rubella
Carub.0007s3536 1.0kb upstream 1.0kb upstream 4858 true scaffold_7: 16152612-16157469 Capsella rubella
Carub.0007s3536 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 16152612-16153611 Capsella rubella
Carub.0007s3536 1.0kb downstream 1.0kb downstream 4858 true scaffold_7: 16153612-16158469 Capsella rubella
Carub.0007s3536 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 16157470-16158469 Capsella rubella
Carub.0007s3536 2.0kb upstream 2.0kb upstream 5858 true scaffold_7: 16151612-16157469 Capsella rubella
Carub.0007s3536 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 16151612-16153611 Capsella rubella
Carub.0007s3536 2.0kb downstream 2.0kb downstream 5858 true scaffold_7: 16153612-16159469 Capsella rubella
Carub.0007s3536 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 16157470-16159469 Capsella rubella
Carub.0007s3536 5.0kb upstream 5.0kb upstream 8858 true scaffold_7: 16148612-16157469 Capsella rubella
Carub.0007s3536 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 16148612-16153611 Capsella rubella
Carub.0007s3536 5.0kb downstream 5.0kb downstream 8858 true scaffold_7: 16153612-16162469 Capsella rubella
Carub.0007s3536 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 16157470-16162469 Capsella rubella
Carub.0007s3536 10.0kb upstream 10.0kb upstream 13858 true scaffold_7: 16143612-16157469 Capsella rubella
Carub.0007s3536 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 16143612-16153611 Capsella rubella
Carub.0007s3536 10.0kb downstream 10.0kb downstream 13858 true scaffold_7: 16153612-16167469 Capsella rubella
Carub.0007s3536 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 16157470-16167469 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372906 5261 Brassicaceae View MSA
123837972 5264 Brassicales-Malvales View MSA
124347337 5266 SBM View MSA
124248739 5268 Malvidae View MSA
124060533 5270 Rosid View MSA
123738198 5271 Pentapetalae View MSA
122788126 5272 Eudicot View MSA
122047441 5273 Angiosperm View MSA
121347014 5274 Embryophyte View MSA
123426203 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain