Gene : Carub.0007s3549 C. rubella v1.1
Defline:  (1 of 105) PF05938 - Plant self-incompatibility protein S1 (Self-incomp_S1) Genomic Order:  3549
Name:  ? Carub.0007s3549 Secondary Identifier:  ? PAC:39234238
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s3549 0.5kb upstream 0.5kb upstream 914 true scaffold_7: 16211380-16212293 Capsella rubella
Carub.0007s3549 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 16211380-16211879 Capsella rubella
Carub.0007s3549 0.5kb downstream 0.5kb downstream 914 true scaffold_7: 16211880-16212793 Capsella rubella
Carub.0007s3549 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 16212294-16212793 Capsella rubella
Carub.0007s3549 1.0kb upstream 1.0kb upstream 1414 true scaffold_7: 16210880-16212293 Capsella rubella
Carub.0007s3549 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 16210880-16211879 Capsella rubella
Carub.0007s3549 1.0kb downstream 1.0kb downstream 1414 true scaffold_7: 16211880-16213293 Capsella rubella
Carub.0007s3549 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 16212294-16213293 Capsella rubella
Carub.0007s3549 2.0kb upstream 2.0kb upstream 2414 true scaffold_7: 16209880-16212293 Capsella rubella
Carub.0007s3549 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 16209880-16211879 Capsella rubella
Carub.0007s3549 2.0kb downstream 2.0kb downstream 2414 true scaffold_7: 16211880-16214293 Capsella rubella
Carub.0007s3549 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 16212294-16214293 Capsella rubella
Carub.0007s3549 5.0kb upstream 5.0kb upstream 5414 true scaffold_7: 16206880-16212293 Capsella rubella
Carub.0007s3549 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 16206880-16211879 Capsella rubella
Carub.0007s3549 5.0kb downstream 5.0kb downstream 5414 true scaffold_7: 16211880-16217293 Capsella rubella
Carub.0007s3549 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 16212294-16217293 Capsella rubella
Carub.0007s3549 10.0kb upstream 10.0kb upstream 10414 true scaffold_7: 16201880-16212293 Capsella rubella
Carub.0007s3549 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 16201880-16211879 Capsella rubella
Carub.0007s3549 10.0kb downstream 10.0kb downstream 10414 true scaffold_7: 16211880-16222293 Capsella rubella
Carub.0007s3549 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 16212294-16222293 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121512059 5273 Angiosperm View MSA
122380220 5261 Brassicaceae View MSA
123802607 5264 Brassicales-Malvales View MSA
124299789 5266 SBM View MSA
124151113 5268 Malvidae View MSA
123876618 5270 Rosid View MSA
123460272 5271 Pentapetalae View MSA
122495649 5272 Eudicot View MSA
120785085 5274 Embryophyte View MSA
122826958 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain