Gene : Carub.0007s3617 C. rubella v1.1
Defline:  (1 of 414) PF13041 - PPR repeat family (PPR_2) Genomic Order:  3617
Name:  ? Carub.0007s3617 Secondary Identifier:  ? PAC:39235833
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s3617 0.5kb upstream 0.5kb upstream 2173 true scaffold_7: 16657615-16659787 Capsella rubella
Carub.0007s3617 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 16659288-16659787 Capsella rubella
Carub.0007s3617 0.5kb downstream 0.5kb downstream 2173 true scaffold_7: 16657115-16659287 Capsella rubella
Carub.0007s3617 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 16657115-16657614 Capsella rubella
Carub.0007s3617 1.0kb upstream 1.0kb upstream 2673 true scaffold_7: 16657615-16660287 Capsella rubella
Carub.0007s3617 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 16659288-16660287 Capsella rubella
Carub.0007s3617 1.0kb downstream 1.0kb downstream 2673 true scaffold_7: 16656615-16659287 Capsella rubella
Carub.0007s3617 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 16656615-16657614 Capsella rubella
Carub.0007s3617 2.0kb upstream 2.0kb upstream 3673 true scaffold_7: 16657615-16661287 Capsella rubella
Carub.0007s3617 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 16659288-16661287 Capsella rubella
Carub.0007s3617 2.0kb downstream 2.0kb downstream 3673 true scaffold_7: 16655615-16659287 Capsella rubella
Carub.0007s3617 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 16655615-16657614 Capsella rubella
Carub.0007s3617 5.0kb upstream 5.0kb upstream 6673 true scaffold_7: 16657615-16664287 Capsella rubella
Carub.0007s3617 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 16659288-16664287 Capsella rubella
Carub.0007s3617 5.0kb downstream 5.0kb downstream 6673 true scaffold_7: 16652615-16659287 Capsella rubella
Carub.0007s3617 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 16652615-16657614 Capsella rubella
Carub.0007s3617 10.0kb upstream 10.0kb upstream 11673 true scaffold_7: 16657615-16669287 Capsella rubella
Carub.0007s3617 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 16659288-16669287 Capsella rubella
Carub.0007s3617 10.0kb downstream 10.0kb downstream 11673 true scaffold_7: 16647615-16659287 Capsella rubella
Carub.0007s3617 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 16647615-16657614 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122335668 5261 Brassicaceae Singleton cluster - no MSA
123841705 5264 Brassicales-Malvales View MSA
124337529 5266 SBM View MSA
124244878 5268 Malvidae View MSA
124063635 5270 Rosid View MSA
123750862 5271 Pentapetalae View MSA
122792992 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain