Gene : Carub.0007s3759 C. rubella v1.1
Defline:  (1 of 4) 4.1.1.39 - Ribulose-bisphosphate carboxylase / RuBP carboxylase Genomic Order:  3759
Name:  ? Carub.0007s3759 Secondary Identifier:  ? PAC:39233510
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella CALVIN-PWY Capsella rubella pathologic  
Crubella PHOTOALL-PWY Capsella rubella pathologic  
Crubella PWY-5723 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s3759 0.5kb upstream 0.5kb upstream 1434 true scaffold_7: 17191418-17192851 Capsella rubella
Carub.0007s3759 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 17191418-17191917 Capsella rubella
Carub.0007s3759 0.5kb downstream 0.5kb downstream 1434 true scaffold_7: 17191918-17193351 Capsella rubella
Carub.0007s3759 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 17192852-17193351 Capsella rubella
Carub.0007s3759 1.0kb upstream 1.0kb upstream 1934 true scaffold_7: 17190918-17192851 Capsella rubella
Carub.0007s3759 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 17190918-17191917 Capsella rubella
Carub.0007s3759 1.0kb downstream 1.0kb downstream 1934 true scaffold_7: 17191918-17193851 Capsella rubella
Carub.0007s3759 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 17192852-17193851 Capsella rubella
Carub.0007s3759 2.0kb upstream 2.0kb upstream 2934 true scaffold_7: 17189918-17192851 Capsella rubella
Carub.0007s3759 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 17189918-17191917 Capsella rubella
Carub.0007s3759 2.0kb downstream 2.0kb downstream 2934 true scaffold_7: 17191918-17194851 Capsella rubella
Carub.0007s3759 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 17192852-17194851 Capsella rubella
Carub.0007s3759 5.0kb upstream 5.0kb upstream 5934 true scaffold_7: 17186918-17192851 Capsella rubella
Carub.0007s3759 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 17186918-17191917 Capsella rubella
Carub.0007s3759 5.0kb downstream 5.0kb downstream 5934 true scaffold_7: 17191918-17197851 Capsella rubella
Carub.0007s3759 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 17192852-17197851 Capsella rubella
Carub.0007s3759 10.0kb upstream 10.0kb upstream 10934 true scaffold_7: 17181918-17192851 Capsella rubella
Carub.0007s3759 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 17181918-17191917 Capsella rubella
Carub.0007s3759 10.0kb downstream 10.0kb downstream 10934 true scaffold_7: 17191918-17202851 Capsella rubella
Carub.0007s3759 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 17192852-17202851 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380509 5261 Brassicaceae View MSA
123836682 5264 Brassicales-Malvales View MSA
124340616 5266 SBM View MSA
124250367 5268 Malvidae View MSA
124066802 5270 Rosid View MSA
123747186 5271 Pentapetalae View MSA
122796864 5272 Eudicot View MSA
122046951 5273 Angiosperm View MSA
121348432 5274 Embryophyte View MSA
123426346 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain