Gene : Carub.0007s3402 C. rubella v1.1
Defline:  (1 of 1) 6.3.2.12 - Dihydrofolate synthase / H(2)-folate synthetase Genomic Order:  3402
Name:  ? Carub.0007s3402 Secondary Identifier:  ? PAC:39234043
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6612 Capsella rubella pathologic  
Crubella PWY-6614 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s3402 0.5kb upstream 0.5kb upstream 3041 true scaffold_7: 15528234-15531274 Capsella rubella
Carub.0007s3402 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 15530775-15531274 Capsella rubella
Carub.0007s3402 0.5kb downstream 0.5kb downstream 3041 true scaffold_7: 15527734-15530774 Capsella rubella
Carub.0007s3402 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 15527734-15528233 Capsella rubella
Carub.0007s3402 1.0kb upstream 1.0kb upstream 3541 true scaffold_7: 15528234-15531774 Capsella rubella
Carub.0007s3402 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 15530775-15531774 Capsella rubella
Carub.0007s3402 1.0kb downstream 1.0kb downstream 3541 true scaffold_7: 15527234-15530774 Capsella rubella
Carub.0007s3402 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 15527234-15528233 Capsella rubella
Carub.0007s3402 2.0kb upstream 2.0kb upstream 4541 true scaffold_7: 15528234-15532774 Capsella rubella
Carub.0007s3402 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 15530775-15532774 Capsella rubella
Carub.0007s3402 2.0kb downstream 2.0kb downstream 4541 true scaffold_7: 15526234-15530774 Capsella rubella
Carub.0007s3402 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 15526234-15528233 Capsella rubella
Carub.0007s3402 5.0kb upstream 5.0kb upstream 7541 true scaffold_7: 15528234-15535774 Capsella rubella
Carub.0007s3402 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 15530775-15535774 Capsella rubella
Carub.0007s3402 5.0kb downstream 5.0kb downstream 7541 true scaffold_7: 15523234-15530774 Capsella rubella
Carub.0007s3402 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 15523234-15528233 Capsella rubella
Carub.0007s3402 10.0kb upstream 10.0kb upstream 12541 true scaffold_7: 15528234-15540774 Capsella rubella
Carub.0007s3402 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 15530775-15540774 Capsella rubella
Carub.0007s3402 10.0kb downstream 10.0kb downstream 12541 true scaffold_7: 15518234-15530774 Capsella rubella
Carub.0007s3402 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 15518234-15528233 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373272 5261 Brassicaceae View MSA
123828953 5264 Brassicales-Malvales View MSA
124340681 5266 SBM View MSA
124239587 5268 Malvidae View MSA
124068555 5270 Rosid View MSA
123738987 5271 Pentapetalae View MSA
122786451 5272 Eudicot View MSA
122043688 5273 Angiosperm View MSA
121344520 5274 Embryophyte View MSA
123426614 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain