Gene : Carub.0007s3300 C. rubella v1.1
Defline:  (1 of 2) PTHR19139//PTHR19139:SF181 - AQUAPORIN TRANSPORTER // AQUAPORIN NIP4-1-RELATED Genomic Order:  3300
Name:  ? Carub.0007s3300 Secondary Identifier:  ? PAC:39232495
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s3300 0.5kb upstream 0.5kb upstream 1958 true scaffold_7: 14993235-14995192 Capsella rubella
Carub.0007s3300 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 14993235-14993734 Capsella rubella
Carub.0007s3300 0.5kb downstream 0.5kb downstream 1958 true scaffold_7: 14993735-14995692 Capsella rubella
Carub.0007s3300 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 14995193-14995692 Capsella rubella
Carub.0007s3300 1.0kb upstream 1.0kb upstream 2458 true scaffold_7: 14992735-14995192 Capsella rubella
Carub.0007s3300 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 14992735-14993734 Capsella rubella
Carub.0007s3300 1.0kb downstream 1.0kb downstream 2458 true scaffold_7: 14993735-14996192 Capsella rubella
Carub.0007s3300 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 14995193-14996192 Capsella rubella
Carub.0007s3300 2.0kb upstream 2.0kb upstream 3458 true scaffold_7: 14991735-14995192 Capsella rubella
Carub.0007s3300 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 14991735-14993734 Capsella rubella
Carub.0007s3300 2.0kb downstream 2.0kb downstream 3458 true scaffold_7: 14993735-14997192 Capsella rubella
Carub.0007s3300 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 14995193-14997192 Capsella rubella
Carub.0007s3300 5.0kb upstream 5.0kb upstream 6458 true scaffold_7: 14988735-14995192 Capsella rubella
Carub.0007s3300 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 14988735-14993734 Capsella rubella
Carub.0007s3300 5.0kb downstream 5.0kb downstream 6458 true scaffold_7: 14993735-15000192 Capsella rubella
Carub.0007s3300 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 14995193-15000192 Capsella rubella
Carub.0007s3300 10.0kb upstream 10.0kb upstream 11458 true scaffold_7: 14983735-14995192 Capsella rubella
Carub.0007s3300 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 14983735-14993734 Capsella rubella
Carub.0007s3300 10.0kb downstream 10.0kb downstream 11458 true scaffold_7: 14993735-15005192 Capsella rubella
Carub.0007s3300 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 14995193-15005192 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380459 5261 Brassicaceae View MSA
123829257 5264 Brassicales-Malvales View MSA
124344874 5266 SBM View MSA
124244379 5268 Malvidae View MSA
124063963 5270 Rosid View MSA
123753474 5271 Pentapetalae View MSA
122796855 5272 Eudicot View MSA
122046920 5273 Angiosperm View MSA
121349244 5274 Embryophyte View MSA
123427856 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain