Gene : Carub.0007s3036 C. rubella v1.1
Defline:  (1 of 1) PTHR23315:SF88 - ARM REPEAT PROTEIN Genomic Order:  3036
Name:  ? Carub.0007s3036 Secondary Identifier:  ? PAC:39233220
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-7511 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s3036 0.5kb upstream 0.5kb upstream 2576 true scaffold_7: 12465632-12468207 Capsella rubella
Carub.0007s3036 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 12467708-12468207 Capsella rubella
Carub.0007s3036 0.5kb downstream 0.5kb downstream 2576 true scaffold_7: 12465132-12467707 Capsella rubella
Carub.0007s3036 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 12465132-12465631 Capsella rubella
Carub.0007s3036 1.0kb upstream 1.0kb upstream 3076 true scaffold_7: 12465632-12468707 Capsella rubella
Carub.0007s3036 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 12467708-12468707 Capsella rubella
Carub.0007s3036 1.0kb downstream 1.0kb downstream 3076 true scaffold_7: 12464632-12467707 Capsella rubella
Carub.0007s3036 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 12464632-12465631 Capsella rubella
Carub.0007s3036 2.0kb upstream 2.0kb upstream 4076 true scaffold_7: 12465632-12469707 Capsella rubella
Carub.0007s3036 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 12467708-12469707 Capsella rubella
Carub.0007s3036 2.0kb downstream 2.0kb downstream 4076 true scaffold_7: 12463632-12467707 Capsella rubella
Carub.0007s3036 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 12463632-12465631 Capsella rubella
Carub.0007s3036 5.0kb upstream 5.0kb upstream 7076 true scaffold_7: 12465632-12472707 Capsella rubella
Carub.0007s3036 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 12467708-12472707 Capsella rubella
Carub.0007s3036 5.0kb downstream 5.0kb downstream 7076 true scaffold_7: 12460632-12467707 Capsella rubella
Carub.0007s3036 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 12460632-12465631 Capsella rubella
Carub.0007s3036 10.0kb upstream 10.0kb upstream 12076 true scaffold_7: 12465632-12477707 Capsella rubella
Carub.0007s3036 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 12467708-12477707 Capsella rubella
Carub.0007s3036 10.0kb downstream 10.0kb downstream 12076 true scaffold_7: 12455632-12467707 Capsella rubella
Carub.0007s3036 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 12455632-12465631 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343344 5261 Brassicaceae View MSA
123833869 5264 Brassicales-Malvales View MSA
124338499 5266 SBM View MSA
124250559 5268 Malvidae View MSA
124062792 5270 Rosid View MSA
123747212 5271 Pentapetalae View MSA
122790234 5272 Eudicot View MSA
122044762 5273 Angiosperm View MSA
121310337 5274 Embryophyte View MSA
123347849 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain