Gene : Carub.0007s3140 C. rubella v1.1
Defline:  (1 of 2) K03236 - translation initiation factor 1A (EIF1A) Genomic Order:  3140
Name:  ? Carub.0007s3140 Secondary Identifier:  ? PAC:39233378
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s3140 0.5kb upstream 0.5kb upstream 1633 true scaffold_7: 13893290-13894922 Capsella rubella
Carub.0007s3140 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 13894423-13894922 Capsella rubella
Carub.0007s3140 0.5kb downstream 0.5kb downstream 1633 true scaffold_7: 13892790-13894422 Capsella rubella
Carub.0007s3140 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 13892790-13893289 Capsella rubella
Carub.0007s3140 1.0kb upstream 1.0kb upstream 2133 true scaffold_7: 13893290-13895422 Capsella rubella
Carub.0007s3140 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 13894423-13895422 Capsella rubella
Carub.0007s3140 1.0kb downstream 1.0kb downstream 2133 true scaffold_7: 13892290-13894422 Capsella rubella
Carub.0007s3140 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 13892290-13893289 Capsella rubella
Carub.0007s3140 2.0kb upstream 2.0kb upstream 3133 true scaffold_7: 13893290-13896422 Capsella rubella
Carub.0007s3140 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 13894423-13896422 Capsella rubella
Carub.0007s3140 2.0kb downstream 2.0kb downstream 3133 true scaffold_7: 13891290-13894422 Capsella rubella
Carub.0007s3140 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 13891290-13893289 Capsella rubella
Carub.0007s3140 5.0kb upstream 5.0kb upstream 6133 true scaffold_7: 13893290-13899422 Capsella rubella
Carub.0007s3140 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 13894423-13899422 Capsella rubella
Carub.0007s3140 5.0kb downstream 5.0kb downstream 6133 true scaffold_7: 13888290-13894422 Capsella rubella
Carub.0007s3140 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 13888290-13893289 Capsella rubella
Carub.0007s3140 10.0kb upstream 10.0kb upstream 11133 true scaffold_7: 13893290-13904422 Capsella rubella
Carub.0007s3140 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 13894423-13904422 Capsella rubella
Carub.0007s3140 10.0kb downstream 10.0kb downstream 11133 true scaffold_7: 13883290-13894422 Capsella rubella
Carub.0007s3140 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 13883290-13893289 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343472 5261 Brassicaceae View MSA
123783660 5264 Brassicales-Malvales View MSA
124281881 5266 SBM View MSA
124243826 5268 Malvidae View MSA
124067350 5270 Rosid View MSA
123749124 5271 Pentapetalae View MSA
122789078 5272 Eudicot View MSA
122047152 5273 Angiosperm View MSA
121349077 5274 Embryophyte View MSA
123428812 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain