Gene : Carub.0007s3147 C. rubella v1.1
Defline:  (1 of 2) PTHR10783:SF46 - EXS (ERD1/XPR1/SYG1) DOMAIN PROTEIN-RELATED Genomic Order:  3147
Name:  ? Carub.0007s3147 Secondary Identifier:  ? PAC:39235771
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s3147 0.5kb upstream 0.5kb upstream 3842 true scaffold_7: 13955491-13959332 Capsella rubella
Carub.0007s3147 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 13955491-13955990 Capsella rubella
Carub.0007s3147 0.5kb downstream 0.5kb downstream 3842 true scaffold_7: 13955991-13959832 Capsella rubella
Carub.0007s3147 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 13959333-13959832 Capsella rubella
Carub.0007s3147 1.0kb upstream 1.0kb upstream 4342 true scaffold_7: 13954991-13959332 Capsella rubella
Carub.0007s3147 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 13954991-13955990 Capsella rubella
Carub.0007s3147 1.0kb downstream 1.0kb downstream 4342 true scaffold_7: 13955991-13960332 Capsella rubella
Carub.0007s3147 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 13959333-13960332 Capsella rubella
Carub.0007s3147 2.0kb upstream 2.0kb upstream 5342 true scaffold_7: 13953991-13959332 Capsella rubella
Carub.0007s3147 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 13953991-13955990 Capsella rubella
Carub.0007s3147 2.0kb downstream 2.0kb downstream 5342 true scaffold_7: 13955991-13961332 Capsella rubella
Carub.0007s3147 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 13959333-13961332 Capsella rubella
Carub.0007s3147 5.0kb upstream 5.0kb upstream 8342 true scaffold_7: 13950991-13959332 Capsella rubella
Carub.0007s3147 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 13950991-13955990 Capsella rubella
Carub.0007s3147 5.0kb downstream 5.0kb downstream 8342 true scaffold_7: 13955991-13964332 Capsella rubella
Carub.0007s3147 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 13959333-13964332 Capsella rubella
Carub.0007s3147 10.0kb upstream 10.0kb upstream 13342 true scaffold_7: 13945991-13959332 Capsella rubella
Carub.0007s3147 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 13945991-13955990 Capsella rubella
Carub.0007s3147 10.0kb downstream 10.0kb downstream 13342 true scaffold_7: 13955991-13969332 Capsella rubella
Carub.0007s3147 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 13959333-13969332 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375007 5261 Brassicaceae View MSA
123831207 5264 Brassicales-Malvales View MSA
124351273 5266 SBM View MSA
124242002 5268 Malvidae View MSA
124063910 5270 Rosid View MSA
123749394 5271 Pentapetalae View MSA
122792287 5272 Eudicot View MSA
122045610 5273 Angiosperm View MSA
121348290 5274 Embryophyte View MSA
123424613 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain