Gene : Carub.0007s3183 C. rubella v1.1
Defline:  (1 of 1) 2.6.1.5 - Tyrosine transaminase / Tyrosine aminotransferase Genomic Order:  3183
Name:  ? Carub.0007s3183 Secondary Identifier:  ? PAC:39233832
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5864 Capsella rubella pathologic  
Crubella PWY-5886 Capsella rubella pathologic  
Crubella TYRFUMCAT-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s3183 0.5kb upstream 0.5kb upstream 2562 true scaffold_7: 14340070-14342631 Capsella rubella
Carub.0007s3183 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 14342132-14342631 Capsella rubella
Carub.0007s3183 0.5kb downstream 0.5kb downstream 2562 true scaffold_7: 14339570-14342131 Capsella rubella
Carub.0007s3183 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 14339570-14340069 Capsella rubella
Carub.0007s3183 1.0kb upstream 1.0kb upstream 3062 true scaffold_7: 14340070-14343131 Capsella rubella
Carub.0007s3183 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 14342132-14343131 Capsella rubella
Carub.0007s3183 1.0kb downstream 1.0kb downstream 3062 true scaffold_7: 14339070-14342131 Capsella rubella
Carub.0007s3183 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 14339070-14340069 Capsella rubella
Carub.0007s3183 2.0kb upstream 2.0kb upstream 4062 true scaffold_7: 14340070-14344131 Capsella rubella
Carub.0007s3183 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 14342132-14344131 Capsella rubella
Carub.0007s3183 2.0kb downstream 2.0kb downstream 4062 true scaffold_7: 14338070-14342131 Capsella rubella
Carub.0007s3183 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 14338070-14340069 Capsella rubella
Carub.0007s3183 5.0kb upstream 5.0kb upstream 7062 true scaffold_7: 14340070-14347131 Capsella rubella
Carub.0007s3183 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 14342132-14347131 Capsella rubella
Carub.0007s3183 5.0kb downstream 5.0kb downstream 7062 true scaffold_7: 14335070-14342131 Capsella rubella
Carub.0007s3183 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 14335070-14340069 Capsella rubella
Carub.0007s3183 10.0kb upstream 10.0kb upstream 12062 true scaffold_7: 14340070-14352131 Capsella rubella
Carub.0007s3183 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 14342132-14352131 Capsella rubella
Carub.0007s3183 10.0kb downstream 10.0kb downstream 12062 true scaffold_7: 14330070-14342131 Capsella rubella
Carub.0007s3183 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 14330070-14340069 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364838 5261 Brassicaceae View MSA
123839473 5264 Brassicales-Malvales View MSA
124343296 5266 SBM View MSA
124252871 5268 Malvidae View MSA
124067351 5270 Rosid View MSA
123744303 5271 Pentapetalae View MSA
122795476 5272 Eudicot View MSA
122051547 5273 Angiosperm View MSA
121351636 5274 Embryophyte View MSA
123426927 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain