Gene : Carub.0002s1416 C. rubella v1.1
Defline:  (1 of 2) K10251 - 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase (HSD17B12, KAR, IFA38) Genomic Order:  1416
Name:  ? Carub.0002s1416 Secondary Identifier:  ? PAC:39243918
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5080 Capsella rubella pathologic  
Crubella PWY-6433 Capsella rubella pathologic  
Crubella PWY-6598 Capsella rubella pathologic  
Crubella PWY-7036 Capsella rubella pathologic  
Crubella PWY-7601 Capsella rubella pathologic  
Crubella PWY-7606 Capsella rubella pathologic  
Crubella PWY-7619 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s1416 0.5kb upstream 0.5kb upstream 2528 true scaffold_2: 8735151-8737678 Capsella rubella
Carub.0002s1416 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 8735151-8735650 Capsella rubella
Carub.0002s1416 0.5kb downstream 0.5kb downstream 2528 true scaffold_2: 8735651-8738178 Capsella rubella
Carub.0002s1416 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 8737679-8738178 Capsella rubella
Carub.0002s1416 1.0kb upstream 1.0kb upstream 3028 true scaffold_2: 8734651-8737678 Capsella rubella
Carub.0002s1416 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 8734651-8735650 Capsella rubella
Carub.0002s1416 1.0kb downstream 1.0kb downstream 3028 true scaffold_2: 8735651-8738678 Capsella rubella
Carub.0002s1416 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 8737679-8738678 Capsella rubella
Carub.0002s1416 2.0kb upstream 2.0kb upstream 4028 true scaffold_2: 8733651-8737678 Capsella rubella
Carub.0002s1416 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 8733651-8735650 Capsella rubella
Carub.0002s1416 2.0kb downstream 2.0kb downstream 4028 true scaffold_2: 8735651-8739678 Capsella rubella
Carub.0002s1416 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 8737679-8739678 Capsella rubella
Carub.0002s1416 5.0kb upstream 5.0kb upstream 7028 true scaffold_2: 8730651-8737678 Capsella rubella
Carub.0002s1416 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 8730651-8735650 Capsella rubella
Carub.0002s1416 5.0kb downstream 5.0kb downstream 7028 true scaffold_2: 8735651-8742678 Capsella rubella
Carub.0002s1416 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 8737679-8742678 Capsella rubella
Carub.0002s1416 10.0kb upstream 10.0kb upstream 12028 true scaffold_2: 8725651-8737678 Capsella rubella
Carub.0002s1416 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 8725651-8735650 Capsella rubella
Carub.0002s1416 10.0kb downstream 10.0kb downstream 12028 true scaffold_2: 8735651-8747678 Capsella rubella
Carub.0002s1416 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 8737679-8747678 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367106 5261 Brassicaceae View MSA
123831568 5264 Brassicales-Malvales View MSA
124344917 5266 SBM View MSA
124251329 5268 Malvidae View MSA
124067012 5270 Rosid View MSA
123737536 5271 Pentapetalae View MSA
122787991 5272 Eudicot View MSA
122050087 5273 Angiosperm View MSA
123428985 5275 Viridiplantae View MSA
121351563 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain