Gene : Carub.0002s1742 C. rubella v1.1
Defline:  (1 of 2) PTHR32080//PTHR32080:SF3 - FAMILY NOT NAMED // CYSTEINE-RICH REPEAT SECRETORY PROTEIN 12-RELATED Genomic Order:  1742
Name:  ? Carub.0002s1742 Secondary Identifier:  ? PAC:39243655
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s1742 0.5kb upstream 0.5kb upstream 1876 true scaffold_2: 10119356-10121231 Capsella rubella
Carub.0002s1742 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 10119356-10119855 Capsella rubella
Carub.0002s1742 0.5kb downstream 0.5kb downstream 1876 true scaffold_2: 10119856-10121731 Capsella rubella
Carub.0002s1742 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 10121232-10121731 Capsella rubella
Carub.0002s1742 1.0kb upstream 1.0kb upstream 2376 true scaffold_2: 10118856-10121231 Capsella rubella
Carub.0002s1742 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 10118856-10119855 Capsella rubella
Carub.0002s1742 1.0kb downstream 1.0kb downstream 2376 true scaffold_2: 10119856-10122231 Capsella rubella
Carub.0002s1742 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 10121232-10122231 Capsella rubella
Carub.0002s1742 2.0kb upstream 2.0kb upstream 3376 true scaffold_2: 10117856-10121231 Capsella rubella
Carub.0002s1742 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 10117856-10119855 Capsella rubella
Carub.0002s1742 2.0kb downstream 2.0kb downstream 3376 true scaffold_2: 10119856-10123231 Capsella rubella
Carub.0002s1742 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 10121232-10123231 Capsella rubella
Carub.0002s1742 5.0kb upstream 5.0kb upstream 6376 true scaffold_2: 10114856-10121231 Capsella rubella
Carub.0002s1742 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 10114856-10119855 Capsella rubella
Carub.0002s1742 5.0kb downstream 5.0kb downstream 6376 true scaffold_2: 10119856-10126231 Capsella rubella
Carub.0002s1742 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 10121232-10126231 Capsella rubella
Carub.0002s1742 10.0kb upstream 10.0kb upstream 11376 true scaffold_2: 10109856-10121231 Capsella rubella
Carub.0002s1742 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 10109856-10119855 Capsella rubella
Carub.0002s1742 10.0kb downstream 10.0kb downstream 11376 true scaffold_2: 10119856-10131231 Capsella rubella
Carub.0002s1742 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 10121232-10131231 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511009 5273 Angiosperm View MSA
122371088 5261 Brassicaceae View MSA
123800100 5264 Brassicales-Malvales View MSA
124297551 5266 SBM View MSA
124149408 5268 Malvidae View MSA
123875221 5270 Rosid View MSA
123459080 5271 Pentapetalae View MSA
122494475 5272 Eudicot View MSA
120784080 5274 Embryophyte View MSA
122826018 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain