Gene : Carub.0002s1779 C. rubella v1.1
Defline:  (1 of 128) PTHR24078 - DNAJ HOMOLOG SUBFAMILY C MEMBER Genomic Order:  1779
Name:  ? Carub.0002s1779 Secondary Identifier:  ? PAC:39243173
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s1779 0.5kb upstream 0.5kb upstream 1743 true scaffold_2: 10272598-10274340 Capsella rubella
Carub.0002s1779 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 10273841-10274340 Capsella rubella
Carub.0002s1779 0.5kb downstream 0.5kb downstream 1743 true scaffold_2: 10272098-10273840 Capsella rubella
Carub.0002s1779 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 10272098-10272597 Capsella rubella
Carub.0002s1779 1.0kb upstream 1.0kb upstream 2243 true scaffold_2: 10272598-10274840 Capsella rubella
Carub.0002s1779 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 10273841-10274840 Capsella rubella
Carub.0002s1779 1.0kb downstream 1.0kb downstream 2243 true scaffold_2: 10271598-10273840 Capsella rubella
Carub.0002s1779 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 10271598-10272597 Capsella rubella
Carub.0002s1779 2.0kb upstream 2.0kb upstream 3243 true scaffold_2: 10272598-10275840 Capsella rubella
Carub.0002s1779 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 10273841-10275840 Capsella rubella
Carub.0002s1779 2.0kb downstream 2.0kb downstream 3243 true scaffold_2: 10270598-10273840 Capsella rubella
Carub.0002s1779 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 10270598-10272597 Capsella rubella
Carub.0002s1779 5.0kb upstream 5.0kb upstream 6243 true scaffold_2: 10272598-10278840 Capsella rubella
Carub.0002s1779 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 10273841-10278840 Capsella rubella
Carub.0002s1779 5.0kb downstream 5.0kb downstream 6243 true scaffold_2: 10267598-10273840 Capsella rubella
Carub.0002s1779 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 10267598-10272597 Capsella rubella
Carub.0002s1779 10.0kb upstream 10.0kb upstream 11243 true scaffold_2: 10272598-10283840 Capsella rubella
Carub.0002s1779 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 10273841-10283840 Capsella rubella
Carub.0002s1779 10.0kb downstream 10.0kb downstream 11243 true scaffold_2: 10262598-10273840 Capsella rubella
Carub.0002s1779 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 10262598-10272597 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360335 5261 Brassicaceae View MSA
123836181 5264 Brassicales-Malvales View MSA
124337805 5266 SBM View MSA
124251895 5268 Malvidae View MSA
124064928 5270 Rosid View MSA
123742769 5271 Pentapetalae View MSA
122796885 5272 Eudicot View MSA
122048239 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121310900 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain