Gene : Carub.0002s1316 C. rubella v1.1
Defline:  (1 of 39) 3.1.4.46 - Glycerophosphodiester phosphodiesterase / Glycerophosphoryl diester phosphodiesterase Genomic Order:  1316
Name:  ? Carub.0002s1316 Secondary Identifier:  ? PAC:39244476
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-7409 Capsella rubella pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s1316 0.5kb upstream 0.5kb upstream 2723 true scaffold_2: 8245210-8247932 Capsella rubella
Carub.0002s1316 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 8247433-8247932 Capsella rubella
Carub.0002s1316 0.5kb downstream 0.5kb downstream 2723 true scaffold_2: 8244710-8247432 Capsella rubella
Carub.0002s1316 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 8244710-8245209 Capsella rubella
Carub.0002s1316 1.0kb upstream 1.0kb upstream 3223 true scaffold_2: 8245210-8248432 Capsella rubella
Carub.0002s1316 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 8247433-8248432 Capsella rubella
Carub.0002s1316 1.0kb downstream 1.0kb downstream 3223 true scaffold_2: 8244210-8247432 Capsella rubella
Carub.0002s1316 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 8244210-8245209 Capsella rubella
Carub.0002s1316 2.0kb upstream 2.0kb upstream 4223 true scaffold_2: 8245210-8249432 Capsella rubella
Carub.0002s1316 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 8247433-8249432 Capsella rubella
Carub.0002s1316 2.0kb downstream 2.0kb downstream 4223 true scaffold_2: 8243210-8247432 Capsella rubella
Carub.0002s1316 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 8243210-8245209 Capsella rubella
Carub.0002s1316 5.0kb upstream 5.0kb upstream 7223 true scaffold_2: 8245210-8252432 Capsella rubella
Carub.0002s1316 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 8247433-8252432 Capsella rubella
Carub.0002s1316 5.0kb downstream 5.0kb downstream 7223 true scaffold_2: 8240210-8247432 Capsella rubella
Carub.0002s1316 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 8240210-8245209 Capsella rubella
Carub.0002s1316 10.0kb upstream 10.0kb upstream 12223 true scaffold_2: 8245210-8257432 Capsella rubella
Carub.0002s1316 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 8247433-8257432 Capsella rubella
Carub.0002s1316 10.0kb downstream 10.0kb downstream 12223 true scaffold_2: 8235210-8247432 Capsella rubella
Carub.0002s1316 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 8235210-8245209 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122344002 5261 Brassicaceae View MSA
123841678 5264 Brassicales-Malvales View MSA
124350842 5266 SBM View MSA
124254633 5268 Malvidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain