Gene : Carub.0002s1389 C. rubella v1.1
Defline:  (1 of 1) 3.5.1.5 - Urease Genomic Order:  1389
Name:  ? Carub.0002s1389 Secondary Identifier:  ? PAC:39245827
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5704 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s1389 0.5kb upstream 0.5kb upstream 5329 true scaffold_2: 8633735-8639063 Capsella rubella
Carub.0002s1389 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 8633735-8634234 Capsella rubella
Carub.0002s1389 0.5kb downstream 0.5kb downstream 5329 true scaffold_2: 8634235-8639563 Capsella rubella
Carub.0002s1389 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 8639064-8639563 Capsella rubella
Carub.0002s1389 1.0kb upstream 1.0kb upstream 5829 true scaffold_2: 8633235-8639063 Capsella rubella
Carub.0002s1389 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 8633235-8634234 Capsella rubella
Carub.0002s1389 1.0kb downstream 1.0kb downstream 5829 true scaffold_2: 8634235-8640063 Capsella rubella
Carub.0002s1389 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 8639064-8640063 Capsella rubella
Carub.0002s1389 2.0kb upstream 2.0kb upstream 6829 true scaffold_2: 8632235-8639063 Capsella rubella
Carub.0002s1389 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 8632235-8634234 Capsella rubella
Carub.0002s1389 2.0kb downstream 2.0kb downstream 6829 true scaffold_2: 8634235-8641063 Capsella rubella
Carub.0002s1389 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 8639064-8641063 Capsella rubella
Carub.0002s1389 5.0kb upstream 5.0kb upstream 9829 true scaffold_2: 8629235-8639063 Capsella rubella
Carub.0002s1389 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 8629235-8634234 Capsella rubella
Carub.0002s1389 5.0kb downstream 5.0kb downstream 9829 true scaffold_2: 8634235-8644063 Capsella rubella
Carub.0002s1389 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 8639064-8644063 Capsella rubella
Carub.0002s1389 10.0kb upstream 10.0kb upstream 14829 true scaffold_2: 8624235-8639063 Capsella rubella
Carub.0002s1389 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 8624235-8634234 Capsella rubella
Carub.0002s1389 10.0kb downstream 10.0kb downstream 14829 true scaffold_2: 8634235-8649063 Capsella rubella
Carub.0002s1389 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 8639064-8649063 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368491 5261 Brassicaceae View MSA
123834301 5264 Brassicales-Malvales View MSA
124343386 5266 SBM View MSA
124238278 5268 Malvidae View MSA
124068403 5270 Rosid View MSA
123740232 5271 Pentapetalae View MSA
122790945 5272 Eudicot View MSA
122047668 5273 Angiosperm View MSA
121343969 5274 Embryophyte View MSA
123425205 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain