Gene : Carub.0002s1394 C. rubella v1.1

Defline:  (1 of 3) K09775 - hypothetical protein (K09775) Genomic Order:  1394
Name:  ? Carub.0002s1394 Secondary Identifier:  ? PAC:39243257

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s1394 0.5kb upstream 0.5kb upstream 1794 true scaffold_2: 8664269-8666062 Capsella rubella
Carub.0002s1394 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 8665563-8666062 Capsella rubella
Carub.0002s1394 0.5kb downstream 0.5kb downstream 1794 true scaffold_2: 8663769-8665562 Capsella rubella
Carub.0002s1394 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 8663769-8664268 Capsella rubella
Carub.0002s1394 1.0kb upstream 1.0kb upstream 2294 true scaffold_2: 8664269-8666562 Capsella rubella
Carub.0002s1394 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 8665563-8666562 Capsella rubella
Carub.0002s1394 1.0kb downstream 1.0kb downstream 2294 true scaffold_2: 8663269-8665562 Capsella rubella
Carub.0002s1394 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 8663269-8664268 Capsella rubella
Carub.0002s1394 2.0kb upstream 2.0kb upstream 3294 true scaffold_2: 8664269-8667562 Capsella rubella
Carub.0002s1394 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 8665563-8667562 Capsella rubella
Carub.0002s1394 2.0kb downstream 2.0kb downstream 3294 true scaffold_2: 8662269-8665562 Capsella rubella
Carub.0002s1394 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 8662269-8664268 Capsella rubella
Carub.0002s1394 5.0kb upstream 5.0kb upstream 6294 true scaffold_2: 8664269-8670562 Capsella rubella
Carub.0002s1394 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 8665563-8670562 Capsella rubella
Carub.0002s1394 5.0kb downstream 5.0kb downstream 6294 true scaffold_2: 8659269-8665562 Capsella rubella
Carub.0002s1394 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 8659269-8664268 Capsella rubella
Carub.0002s1394 10.0kb upstream 10.0kb upstream 11294 true scaffold_2: 8664269-8675562 Capsella rubella
Carub.0002s1394 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 8665563-8675562 Capsella rubella
Carub.0002s1394 10.0kb downstream 10.0kb downstream 11294 true scaffold_2: 8654269-8665562 Capsella rubella
Carub.0002s1394 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 8654269-8664268 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375643 5261 Brassicaceae View MSA
123838306 5264 Brassicales-Malvales View MSA
124345471 5266 SBM View MSA
124251459 5268 Malvidae View MSA
124064436 5270 Rosid View MSA
123747764 5271 Pentapetalae View MSA
122794192 5272 Eudicot View MSA
122050620 5273 Angiosperm View MSA
123429132 5275 Viridiplantae View MSA
121350526 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain