Gene : Carub.0002s1636 C. rubella v1.1
Defline:  (1 of 1) PTHR12300//PTHR12300:SF51 - HVA22-LIKE PROTEINS // HVA22-LIKE PROTEIN C Genomic Order:  1636
Name:  ? Carub.0002s1636 Secondary Identifier:  ? PAC:39243498
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s1636 0.5kb upstream 0.5kb upstream 2156 true scaffold_2: 9654965-9657120 Capsella rubella
Carub.0002s1636 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 9654965-9655464 Capsella rubella
Carub.0002s1636 0.5kb downstream 0.5kb downstream 2156 true scaffold_2: 9655465-9657620 Capsella rubella
Carub.0002s1636 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 9657121-9657620 Capsella rubella
Carub.0002s1636 1.0kb upstream 1.0kb upstream 2656 true scaffold_2: 9654465-9657120 Capsella rubella
Carub.0002s1636 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 9654465-9655464 Capsella rubella
Carub.0002s1636 1.0kb downstream 1.0kb downstream 2656 true scaffold_2: 9655465-9658120 Capsella rubella
Carub.0002s1636 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 9657121-9658120 Capsella rubella
Carub.0002s1636 2.0kb upstream 2.0kb upstream 3656 true scaffold_2: 9653465-9657120 Capsella rubella
Carub.0002s1636 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 9653465-9655464 Capsella rubella
Carub.0002s1636 2.0kb downstream 2.0kb downstream 3656 true scaffold_2: 9655465-9659120 Capsella rubella
Carub.0002s1636 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 9657121-9659120 Capsella rubella
Carub.0002s1636 5.0kb upstream 5.0kb upstream 6656 true scaffold_2: 9650465-9657120 Capsella rubella
Carub.0002s1636 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 9650465-9655464 Capsella rubella
Carub.0002s1636 5.0kb downstream 5.0kb downstream 6656 true scaffold_2: 9655465-9662120 Capsella rubella
Carub.0002s1636 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 9657121-9662120 Capsella rubella
Carub.0002s1636 10.0kb upstream 10.0kb upstream 11656 true scaffold_2: 9645465-9657120 Capsella rubella
Carub.0002s1636 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 9645465-9655464 Capsella rubella
Carub.0002s1636 10.0kb downstream 10.0kb downstream 11656 true scaffold_2: 9655465-9667120 Capsella rubella
Carub.0002s1636 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 9657121-9667120 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373604 5261 Brassicaceae View MSA
123835000 5264 Brassicales-Malvales View MSA
124348158 5266 SBM View MSA
124244306 5268 Malvidae View MSA
124069874 5270 Rosid View MSA
123753411 5271 Pentapetalae View MSA
122797924 5272 Eudicot View MSA
122050358 5273 Angiosperm View MSA
121349779 5274 Embryophyte View MSA
123427624 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain