Gene : Carub.0002s1673 C. rubella v1.1
Defline:  (1 of 6) K11644 - paired amphipathic helix protein Sin3a (SIN3A) Genomic Order:  1673
Name:  ? Carub.0002s1673 Secondary Identifier:  ? PAC:39245575
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s1673 0.5kb upstream 0.5kb upstream 7535 true scaffold_2: 9829527-9837061 Capsella rubella
Carub.0002s1673 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 9829527-9830026 Capsella rubella
Carub.0002s1673 0.5kb downstream 0.5kb downstream 7535 true scaffold_2: 9830027-9837561 Capsella rubella
Carub.0002s1673 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 9837062-9837561 Capsella rubella
Carub.0002s1673 1.0kb upstream 1.0kb upstream 8035 true scaffold_2: 9829027-9837061 Capsella rubella
Carub.0002s1673 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 9829027-9830026 Capsella rubella
Carub.0002s1673 1.0kb downstream 1.0kb downstream 8035 true scaffold_2: 9830027-9838061 Capsella rubella
Carub.0002s1673 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 9837062-9838061 Capsella rubella
Carub.0002s1673 2.0kb upstream 2.0kb upstream 9035 true scaffold_2: 9828027-9837061 Capsella rubella
Carub.0002s1673 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 9828027-9830026 Capsella rubella
Carub.0002s1673 2.0kb downstream 2.0kb downstream 9035 true scaffold_2: 9830027-9839061 Capsella rubella
Carub.0002s1673 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 9837062-9839061 Capsella rubella
Carub.0002s1673 5.0kb upstream 5.0kb upstream 12035 true scaffold_2: 9825027-9837061 Capsella rubella
Carub.0002s1673 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 9825027-9830026 Capsella rubella
Carub.0002s1673 5.0kb downstream 5.0kb downstream 12035 true scaffold_2: 9830027-9842061 Capsella rubella
Carub.0002s1673 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 9837062-9842061 Capsella rubella
Carub.0002s1673 10.0kb upstream 10.0kb upstream 17035 true scaffold_2: 9820027-9837061 Capsella rubella
Carub.0002s1673 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 9820027-9830026 Capsella rubella
Carub.0002s1673 10.0kb downstream 10.0kb downstream 17035 true scaffold_2: 9830027-9847061 Capsella rubella
Carub.0002s1673 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 9837062-9847061 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376043 5261 Brassicaceae View MSA
123838025 5264 Brassicales-Malvales View MSA
124338012 5266 SBM View MSA
124241191 5268 Malvidae View MSA
124067617 5270 Rosid View MSA
123752813 5271 Pentapetalae View MSA
122791038 5272 Eudicot View MSA
122047034 5273 Angiosperm View MSA
121346152 5274 Embryophyte View MSA
123428507 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain