Gene : Carub.0002s1706 C. rubella v1.1
Defline:  (1 of 3) PTHR31458//PTHR31458:SF3 - FAMILY NOT NAMED // POLYGALACTURONASE NON-CATALYTIC SUBUNIT JP630-RELATED Genomic Order:  1706
Name:  ? Carub.0002s1706 Secondary Identifier:  ? PAC:39244341
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s1706 0.5kb upstream 0.5kb upstream 2784 true scaffold_2: 9969152-9971935 Capsella rubella
Carub.0002s1706 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 9971436-9971935 Capsella rubella
Carub.0002s1706 0.5kb downstream 0.5kb downstream 2784 true scaffold_2: 9968652-9971435 Capsella rubella
Carub.0002s1706 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 9968652-9969151 Capsella rubella
Carub.0002s1706 1.0kb upstream 1.0kb upstream 3284 true scaffold_2: 9969152-9972435 Capsella rubella
Carub.0002s1706 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 9971436-9972435 Capsella rubella
Carub.0002s1706 1.0kb downstream 1.0kb downstream 3284 true scaffold_2: 9968152-9971435 Capsella rubella
Carub.0002s1706 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 9968152-9969151 Capsella rubella
Carub.0002s1706 2.0kb upstream 2.0kb upstream 4284 true scaffold_2: 9969152-9973435 Capsella rubella
Carub.0002s1706 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 9971436-9973435 Capsella rubella
Carub.0002s1706 2.0kb downstream 2.0kb downstream 4284 true scaffold_2: 9967152-9971435 Capsella rubella
Carub.0002s1706 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 9967152-9969151 Capsella rubella
Carub.0002s1706 5.0kb upstream 5.0kb upstream 7284 true scaffold_2: 9969152-9976435 Capsella rubella
Carub.0002s1706 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 9971436-9976435 Capsella rubella
Carub.0002s1706 5.0kb downstream 5.0kb downstream 7284 true scaffold_2: 9964152-9971435 Capsella rubella
Carub.0002s1706 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 9964152-9969151 Capsella rubella
Carub.0002s1706 10.0kb upstream 10.0kb upstream 12284 true scaffold_2: 9969152-9981435 Capsella rubella
Carub.0002s1706 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 9971436-9981435 Capsella rubella
Carub.0002s1706 10.0kb downstream 10.0kb downstream 12284 true scaffold_2: 9959152-9971435 Capsella rubella
Carub.0002s1706 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 9959152-9969151 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361299 5261 Brassicaceae View MSA
123832587 5264 Brassicales-Malvales View MSA
124343319 5266 SBM View MSA
124238820 5268 Malvidae View MSA
124060515 5270 Rosid View MSA
123747690 5271 Pentapetalae View MSA
122795038 5272 Eudicot View MSA
122050223 5273 Angiosperm View MSA
121351029 5274 Embryophyte View MSA
123381981 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain