Gene : Carub.0002s1694 C. rubella v1.1
Defline:  (1 of 52) PF00892 - EamA-like transporter family (EamA) Genomic Order:  1694
Name:  ? Carub.0002s1694 Secondary Identifier:  ? PAC:39243236
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s1694 0.5kb upstream 0.5kb upstream 2655 true scaffold_2: 9917839-9920493 Capsella rubella
Carub.0002s1694 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 9919994-9920493 Capsella rubella
Carub.0002s1694 0.5kb downstream 0.5kb downstream 2655 true scaffold_2: 9917339-9919993 Capsella rubella
Carub.0002s1694 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 9917339-9917838 Capsella rubella
Carub.0002s1694 1.0kb upstream 1.0kb upstream 3155 true scaffold_2: 9917839-9920993 Capsella rubella
Carub.0002s1694 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 9919994-9920993 Capsella rubella
Carub.0002s1694 1.0kb downstream 1.0kb downstream 3155 true scaffold_2: 9916839-9919993 Capsella rubella
Carub.0002s1694 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 9916839-9917838 Capsella rubella
Carub.0002s1694 2.0kb upstream 2.0kb upstream 4155 true scaffold_2: 9917839-9921993 Capsella rubella
Carub.0002s1694 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 9919994-9921993 Capsella rubella
Carub.0002s1694 2.0kb downstream 2.0kb downstream 4155 true scaffold_2: 9915839-9919993 Capsella rubella
Carub.0002s1694 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 9915839-9917838 Capsella rubella
Carub.0002s1694 5.0kb upstream 5.0kb upstream 7155 true scaffold_2: 9917839-9924993 Capsella rubella
Carub.0002s1694 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 9919994-9924993 Capsella rubella
Carub.0002s1694 5.0kb downstream 5.0kb downstream 7155 true scaffold_2: 9912839-9919993 Capsella rubella
Carub.0002s1694 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 9912839-9917838 Capsella rubella
Carub.0002s1694 10.0kb upstream 10.0kb upstream 12155 true scaffold_2: 9917839-9929993 Capsella rubella
Carub.0002s1694 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 9919994-9929993 Capsella rubella
Carub.0002s1694 10.0kb downstream 10.0kb downstream 12155 true scaffold_2: 9907839-9919993 Capsella rubella
Carub.0002s1694 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 9907839-9917838 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364234 5261 Brassicaceae View MSA
123833158 5264 Brassicales-Malvales View MSA
124350428 5266 SBM View MSA
124251502 5268 Malvidae View MSA
124073140 5270 Rosid View MSA
123752640 5271 Pentapetalae View MSA
122797253 5272 Eudicot View MSA
122050761 5273 Angiosperm View MSA
121312106 5274 Embryophyte View MSA
123349308 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain