Gene : Carub.0002s1250 C. rubella v1.1
Defline:  (1 of 2) PTHR16223:SF19 - TRANSCRIPTION FACTOR BHLH83-RELATED Genomic Order:  1250
Name:  ? Carub.0002s1250 Secondary Identifier:  ? PAC:39244671
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s1250 0.5kb upstream 0.5kb upstream 1793 true scaffold_2: 7962825-7964617 Capsella rubella
Carub.0002s1250 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 7962825-7963324 Capsella rubella
Carub.0002s1250 0.5kb downstream 0.5kb downstream 1793 true scaffold_2: 7963325-7965117 Capsella rubella
Carub.0002s1250 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 7964618-7965117 Capsella rubella
Carub.0002s1250 1.0kb upstream 1.0kb upstream 2293 true scaffold_2: 7962325-7964617 Capsella rubella
Carub.0002s1250 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 7962325-7963324 Capsella rubella
Carub.0002s1250 1.0kb downstream 1.0kb downstream 2293 true scaffold_2: 7963325-7965617 Capsella rubella
Carub.0002s1250 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 7964618-7965617 Capsella rubella
Carub.0002s1250 2.0kb upstream 2.0kb upstream 3293 true scaffold_2: 7961325-7964617 Capsella rubella
Carub.0002s1250 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 7961325-7963324 Capsella rubella
Carub.0002s1250 2.0kb downstream 2.0kb downstream 3293 true scaffold_2: 7963325-7966617 Capsella rubella
Carub.0002s1250 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 7964618-7966617 Capsella rubella
Carub.0002s1250 5.0kb upstream 5.0kb upstream 6293 true scaffold_2: 7958325-7964617 Capsella rubella
Carub.0002s1250 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 7958325-7963324 Capsella rubella
Carub.0002s1250 5.0kb downstream 5.0kb downstream 6293 true scaffold_2: 7963325-7969617 Capsella rubella
Carub.0002s1250 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 7964618-7969617 Capsella rubella
Carub.0002s1250 10.0kb upstream 10.0kb upstream 11293 true scaffold_2: 7953325-7964617 Capsella rubella
Carub.0002s1250 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 7953325-7963324 Capsella rubella
Carub.0002s1250 10.0kb downstream 10.0kb downstream 11293 true scaffold_2: 7963325-7974617 Capsella rubella
Carub.0002s1250 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 7964618-7974617 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361624 5261 Brassicaceae View MSA
123840367 5264 Brassicales-Malvales View MSA
124342678 5266 SBM View MSA
124253449 5268 Malvidae View MSA
124064521 5270 Rosid View MSA
123740675 5271 Pentapetalae View MSA
122794113 5272 Eudicot View MSA
122049843 5273 Angiosperm View MSA
121311613 5274 Embryophyte View MSA
123348888 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain