Gene : Carub.0002s1439 C. rubella v1.1
Defline:  (1 of 33) PF03000 - NPH3 family (NPH3) Genomic Order:  1439
Name:  ? Carub.0002s1439 Secondary Identifier:  ? PAC:39244808
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s1439 0.5kb upstream 0.5kb upstream 3610 true scaffold_2: 8832430-8836039 Capsella rubella
Carub.0002s1439 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 8832430-8832929 Capsella rubella
Carub.0002s1439 0.5kb downstream 0.5kb downstream 3610 true scaffold_2: 8832930-8836539 Capsella rubella
Carub.0002s1439 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 8836040-8836539 Capsella rubella
Carub.0002s1439 1.0kb upstream 1.0kb upstream 4110 true scaffold_2: 8831930-8836039 Capsella rubella
Carub.0002s1439 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 8831930-8832929 Capsella rubella
Carub.0002s1439 1.0kb downstream 1.0kb downstream 4110 true scaffold_2: 8832930-8837039 Capsella rubella
Carub.0002s1439 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 8836040-8837039 Capsella rubella
Carub.0002s1439 2.0kb upstream 2.0kb upstream 5110 true scaffold_2: 8830930-8836039 Capsella rubella
Carub.0002s1439 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 8830930-8832929 Capsella rubella
Carub.0002s1439 2.0kb downstream 2.0kb downstream 5110 true scaffold_2: 8832930-8838039 Capsella rubella
Carub.0002s1439 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 8836040-8838039 Capsella rubella
Carub.0002s1439 5.0kb upstream 5.0kb upstream 8110 true scaffold_2: 8827930-8836039 Capsella rubella
Carub.0002s1439 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 8827930-8832929 Capsella rubella
Carub.0002s1439 5.0kb downstream 5.0kb downstream 8110 true scaffold_2: 8832930-8841039 Capsella rubella
Carub.0002s1439 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 8836040-8841039 Capsella rubella
Carub.0002s1439 10.0kb upstream 10.0kb upstream 13110 true scaffold_2: 8822930-8836039 Capsella rubella
Carub.0002s1439 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 8822930-8832929 Capsella rubella
Carub.0002s1439 10.0kb downstream 10.0kb downstream 13110 true scaffold_2: 8832930-8846039 Capsella rubella
Carub.0002s1439 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 8836040-8846039 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373683 5261 Brassicaceae View MSA
123832427 5264 Brassicales-Malvales View MSA
124343318 5266 SBM View MSA
124236995 5268 Malvidae View MSA
124063063 5270 Rosid View MSA
123741197 5271 Pentapetalae View MSA
122790545 5272 Eudicot View MSA
122042377 5273 Angiosperm View MSA
121350883 5274 Embryophyte View MSA
123381921 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain