Gene : Carub.0002s1448 C. rubella v1.1
Defline:  (1 of 2) K00999 - CDP-diacylglycerol--inositol 3-phosphatidyltransferase (CDIPT) Genomic Order:  1448
Name:  ? Carub.0002s1448 Secondary Identifier:  ? PAC:39244305
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6351 Capsella rubella pathologic  
Crubella PWY-6352 Capsella rubella pathologic  
Crubella PWY-7625 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s1448 0.5kb upstream 0.5kb upstream 2613 true scaffold_2: 8856585-8859197 Capsella rubella
Carub.0002s1448 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 8856585-8857084 Capsella rubella
Carub.0002s1448 0.5kb downstream 0.5kb downstream 2613 true scaffold_2: 8857085-8859697 Capsella rubella
Carub.0002s1448 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 8859198-8859697 Capsella rubella
Carub.0002s1448 1.0kb upstream 1.0kb upstream 3113 true scaffold_2: 8856085-8859197 Capsella rubella
Carub.0002s1448 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 8856085-8857084 Capsella rubella
Carub.0002s1448 1.0kb downstream 1.0kb downstream 3113 true scaffold_2: 8857085-8860197 Capsella rubella
Carub.0002s1448 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 8859198-8860197 Capsella rubella
Carub.0002s1448 2.0kb upstream 2.0kb upstream 4113 true scaffold_2: 8855085-8859197 Capsella rubella
Carub.0002s1448 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 8855085-8857084 Capsella rubella
Carub.0002s1448 2.0kb downstream 2.0kb downstream 4113 true scaffold_2: 8857085-8861197 Capsella rubella
Carub.0002s1448 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 8859198-8861197 Capsella rubella
Carub.0002s1448 5.0kb upstream 5.0kb upstream 7113 true scaffold_2: 8852085-8859197 Capsella rubella
Carub.0002s1448 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 8852085-8857084 Capsella rubella
Carub.0002s1448 5.0kb downstream 5.0kb downstream 7113 true scaffold_2: 8857085-8864197 Capsella rubella
Carub.0002s1448 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 8859198-8864197 Capsella rubella
Carub.0002s1448 10.0kb upstream 10.0kb upstream 12113 true scaffold_2: 8847085-8859197 Capsella rubella
Carub.0002s1448 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 8847085-8857084 Capsella rubella
Carub.0002s1448 10.0kb downstream 10.0kb downstream 12113 true scaffold_2: 8857085-8869197 Capsella rubella
Carub.0002s1448 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 8859198-8869197 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368141 5261 Brassicaceae View MSA
123837573 5264 Brassicales-Malvales View MSA
124322337 5266 SBM View MSA
124237971 5268 Malvidae View MSA
124074338 5270 Rosid View MSA
123738044 5271 Pentapetalae View MSA
122788491 5272 Eudicot View MSA
122046136 5273 Angiosperm View MSA
121345622 5274 Embryophyte View MSA
123428790 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain