Gene : Carub.0002s1504 C. rubella v1.1
Defline:  (1 of 2) PTHR31561:SF5 - 3-KETOACYL-COA SYNTHASE 5-RELATED Genomic Order:  1504
Name:  ? Carub.0002s1504 Secondary Identifier:  ? PAC:39245769
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5080 Capsella rubella pathologic  
Crubella PWY-6433 Capsella rubella pathologic  
Crubella PWY-6598 Capsella rubella pathologic  
Crubella PWY-7036 Capsella rubella pathologic  
Crubella PWY-7601 Capsella rubella pathologic  
Crubella PWY-7619 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s1504 0.5kb upstream 0.5kb upstream 2611 true scaffold_2: 9092646-9095256 Capsella rubella
Carub.0002s1504 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 9094757-9095256 Capsella rubella
Carub.0002s1504 0.5kb downstream 0.5kb downstream 2611 true scaffold_2: 9092146-9094756 Capsella rubella
Carub.0002s1504 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 9092146-9092645 Capsella rubella
Carub.0002s1504 1.0kb upstream 1.0kb upstream 3111 true scaffold_2: 9092646-9095756 Capsella rubella
Carub.0002s1504 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 9094757-9095756 Capsella rubella
Carub.0002s1504 1.0kb downstream 1.0kb downstream 3111 true scaffold_2: 9091646-9094756 Capsella rubella
Carub.0002s1504 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 9091646-9092645 Capsella rubella
Carub.0002s1504 2.0kb upstream 2.0kb upstream 4111 true scaffold_2: 9092646-9096756 Capsella rubella
Carub.0002s1504 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 9094757-9096756 Capsella rubella
Carub.0002s1504 2.0kb downstream 2.0kb downstream 4111 true scaffold_2: 9090646-9094756 Capsella rubella
Carub.0002s1504 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 9090646-9092645 Capsella rubella
Carub.0002s1504 5.0kb upstream 5.0kb upstream 7111 true scaffold_2: 9092646-9099756 Capsella rubella
Carub.0002s1504 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 9094757-9099756 Capsella rubella
Carub.0002s1504 5.0kb downstream 5.0kb downstream 7111 true scaffold_2: 9087646-9094756 Capsella rubella
Carub.0002s1504 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 9087646-9092645 Capsella rubella
Carub.0002s1504 10.0kb upstream 10.0kb upstream 12111 true scaffold_2: 9092646-9104756 Capsella rubella
Carub.0002s1504 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 9094757-9104756 Capsella rubella
Carub.0002s1504 10.0kb downstream 10.0kb downstream 12111 true scaffold_2: 9082646-9094756 Capsella rubella
Carub.0002s1504 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 9082646-9092645 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373654 5261 Brassicaceae View MSA
123832639 5264 Brassicales-Malvales View MSA
124344700 5266 SBM View MSA
124247934 5268 Malvidae View MSA
124074382 5270 Rosid View MSA
123744253 5271 Pentapetalae View MSA
122788881 5272 Eudicot View MSA
122042493 5273 Angiosperm View MSA
121309978 5274 Embryophyte View MSA
123347592 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain