Gene : Carub.0002s1528 C. rubella v1.1
Defline:  (1 of 1) PTHR20922:SF17 - F24J5.3 Genomic Order:  1528
Name:  ? Carub.0002s1528 Secondary Identifier:  ? PAC:39244852
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s1528 0.5kb upstream 0.5kb upstream 1661 true scaffold_2: 9191938-9193598 Capsella rubella
Carub.0002s1528 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 9193099-9193598 Capsella rubella
Carub.0002s1528 0.5kb downstream 0.5kb downstream 1661 true scaffold_2: 9191438-9193098 Capsella rubella
Carub.0002s1528 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 9191438-9191937 Capsella rubella
Carub.0002s1528 1.0kb upstream 1.0kb upstream 2161 true scaffold_2: 9191938-9194098 Capsella rubella
Carub.0002s1528 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 9193099-9194098 Capsella rubella
Carub.0002s1528 1.0kb downstream 1.0kb downstream 2161 true scaffold_2: 9190938-9193098 Capsella rubella
Carub.0002s1528 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 9190938-9191937 Capsella rubella
Carub.0002s1528 2.0kb upstream 2.0kb upstream 3161 true scaffold_2: 9191938-9195098 Capsella rubella
Carub.0002s1528 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 9193099-9195098 Capsella rubella
Carub.0002s1528 2.0kb downstream 2.0kb downstream 3161 true scaffold_2: 9189938-9193098 Capsella rubella
Carub.0002s1528 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 9189938-9191937 Capsella rubella
Carub.0002s1528 5.0kb upstream 5.0kb upstream 6161 true scaffold_2: 9191938-9198098 Capsella rubella
Carub.0002s1528 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 9193099-9198098 Capsella rubella
Carub.0002s1528 5.0kb downstream 5.0kb downstream 6161 true scaffold_2: 9186938-9193098 Capsella rubella
Carub.0002s1528 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 9186938-9191937 Capsella rubella
Carub.0002s1528 10.0kb upstream 10.0kb upstream 11161 true scaffold_2: 9191938-9203098 Capsella rubella
Carub.0002s1528 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 9193099-9203098 Capsella rubella
Carub.0002s1528 10.0kb downstream 10.0kb downstream 11161 true scaffold_2: 9181938-9193098 Capsella rubella
Carub.0002s1528 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 9181938-9191937 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375514 5261 Brassicaceae View MSA
123832584 5264 Brassicales-Malvales View MSA
124346643 5266 SBM View MSA
124238453 5268 Malvidae View MSA
124068181 5270 Rosid View MSA
123747456 5271 Pentapetalae View MSA
122796355 5272 Eudicot View MSA
122048491 5273 Angiosperm View MSA
121349693 5274 Embryophyte View MSA
123425918 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain