Gene : Carub.0002s1539 C. rubella v1.1
Defline:  (1 of 2) PTHR12565:SF77 - TRANSCRIPTION FACTOR AIG1-RELATED Genomic Order:  1539
Name:  ? Carub.0002s1539 Secondary Identifier:  ? PAC:39244920
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s1539 0.5kb upstream 0.5kb upstream 2500 true scaffold_2: 9254700-9257199 Capsella rubella
Carub.0002s1539 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 9254700-9255199 Capsella rubella
Carub.0002s1539 0.5kb downstream 0.5kb downstream 2500 true scaffold_2: 9255200-9257699 Capsella rubella
Carub.0002s1539 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 9257200-9257699 Capsella rubella
Carub.0002s1539 1.0kb upstream 1.0kb upstream 3000 true scaffold_2: 9254200-9257199 Capsella rubella
Carub.0002s1539 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 9254200-9255199 Capsella rubella
Carub.0002s1539 1.0kb downstream 1.0kb downstream 3000 true scaffold_2: 9255200-9258199 Capsella rubella
Carub.0002s1539 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 9257200-9258199 Capsella rubella
Carub.0002s1539 2.0kb upstream 2.0kb upstream 4000 true scaffold_2: 9253200-9257199 Capsella rubella
Carub.0002s1539 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 9253200-9255199 Capsella rubella
Carub.0002s1539 2.0kb downstream 2.0kb downstream 4000 true scaffold_2: 9255200-9259199 Capsella rubella
Carub.0002s1539 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 9257200-9259199 Capsella rubella
Carub.0002s1539 5.0kb upstream 5.0kb upstream 7000 true scaffold_2: 9250200-9257199 Capsella rubella
Carub.0002s1539 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 9250200-9255199 Capsella rubella
Carub.0002s1539 5.0kb downstream 5.0kb downstream 7000 true scaffold_2: 9255200-9262199 Capsella rubella
Carub.0002s1539 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 9257200-9262199 Capsella rubella
Carub.0002s1539 10.0kb upstream 10.0kb upstream 12000 true scaffold_2: 9245200-9257199 Capsella rubella
Carub.0002s1539 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 9245200-9255199 Capsella rubella
Carub.0002s1539 10.0kb downstream 10.0kb downstream 12000 true scaffold_2: 9255200-9267199 Capsella rubella
Carub.0002s1539 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 9257200-9267199 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362303 5261 Brassicaceae View MSA
123828870 5264 Brassicales-Malvales View MSA
124336631 5266 SBM View MSA
124251378 5268 Malvidae View MSA
124065415 5270 Rosid View MSA
123749080 5271 Pentapetalae View MSA
122789211 5272 Eudicot View MSA
122048947 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain