Gene : Carub.0002s1571 C. rubella v1.1
Defline:  (1 of 4) PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1571
Name:  ? Carub.0002s1571 Secondary Identifier:  ? PAC:39244238
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s1571 0.5kb upstream 0.5kb upstream 1174 true scaffold_2: 9379356-9380529 Capsella rubella
Carub.0002s1571 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 9379356-9379855 Capsella rubella
Carub.0002s1571 0.5kb downstream 0.5kb downstream 1174 true scaffold_2: 9379856-9381029 Capsella rubella
Carub.0002s1571 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 9380530-9381029 Capsella rubella
Carub.0002s1571 1.0kb upstream 1.0kb upstream 1674 true scaffold_2: 9378856-9380529 Capsella rubella
Carub.0002s1571 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 9378856-9379855 Capsella rubella
Carub.0002s1571 1.0kb downstream 1.0kb downstream 1674 true scaffold_2: 9379856-9381529 Capsella rubella
Carub.0002s1571 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 9380530-9381529 Capsella rubella
Carub.0002s1571 2.0kb upstream 2.0kb upstream 2674 true scaffold_2: 9377856-9380529 Capsella rubella
Carub.0002s1571 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 9377856-9379855 Capsella rubella
Carub.0002s1571 2.0kb downstream 2.0kb downstream 2674 true scaffold_2: 9379856-9382529 Capsella rubella
Carub.0002s1571 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 9380530-9382529 Capsella rubella
Carub.0002s1571 5.0kb upstream 5.0kb upstream 5674 true scaffold_2: 9374856-9380529 Capsella rubella
Carub.0002s1571 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 9374856-9379855 Capsella rubella
Carub.0002s1571 5.0kb downstream 5.0kb downstream 5674 true scaffold_2: 9379856-9385529 Capsella rubella
Carub.0002s1571 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 9380530-9385529 Capsella rubella
Carub.0002s1571 10.0kb upstream 10.0kb upstream 10674 true scaffold_2: 9369856-9380529 Capsella rubella
Carub.0002s1571 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 9369856-9379855 Capsella rubella
Carub.0002s1571 10.0kb downstream 10.0kb downstream 10674 true scaffold_2: 9379856-9390529 Capsella rubella
Carub.0002s1571 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 9380530-9390529 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360690 5261 Brassicaceae View MSA
123798008 5264 Brassicales-Malvales View MSA
124351540 5266 SBM View MSA
124249104 5268 Malvidae View MSA
124074768 5270 Rosid View MSA
123753748 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain