Gene : Carub.0002s1171 C. rubella v1.1
Defline:  (1 of 2) PTHR10250//PTHR10250:SF16 - MICROSOMAL GLUTATHIONE S-TRANSFERASE // GLUTATHIONE S-TRANSFERASE-RELATED Genomic Order:  1171
Name:  ? Carub.0002s1171 Secondary Identifier:  ? PAC:39243390
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6842 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s1171 0.5kb upstream 0.5kb upstream 2914 true scaffold_2: 7507783-7510696 Capsella rubella
Carub.0002s1171 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 7507783-7508282 Capsella rubella
Carub.0002s1171 0.5kb downstream 0.5kb downstream 2914 true scaffold_2: 7508283-7511196 Capsella rubella
Carub.0002s1171 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 7510697-7511196 Capsella rubella
Carub.0002s1171 1.0kb upstream 1.0kb upstream 3414 true scaffold_2: 7507283-7510696 Capsella rubella
Carub.0002s1171 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 7507283-7508282 Capsella rubella
Carub.0002s1171 1.0kb downstream 1.0kb downstream 3414 true scaffold_2: 7508283-7511696 Capsella rubella
Carub.0002s1171 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 7510697-7511696 Capsella rubella
Carub.0002s1171 2.0kb upstream 2.0kb upstream 4414 true scaffold_2: 7506283-7510696 Capsella rubella
Carub.0002s1171 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 7506283-7508282 Capsella rubella
Carub.0002s1171 2.0kb downstream 2.0kb downstream 4414 true scaffold_2: 7508283-7512696 Capsella rubella
Carub.0002s1171 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 7510697-7512696 Capsella rubella
Carub.0002s1171 5.0kb upstream 5.0kb upstream 7414 true scaffold_2: 7503283-7510696 Capsella rubella
Carub.0002s1171 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 7503283-7508282 Capsella rubella
Carub.0002s1171 5.0kb downstream 5.0kb downstream 7414 true scaffold_2: 7508283-7515696 Capsella rubella
Carub.0002s1171 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 7510697-7515696 Capsella rubella
Carub.0002s1171 10.0kb upstream 10.0kb upstream 12414 true scaffold_2: 7498283-7510696 Capsella rubella
Carub.0002s1171 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 7498283-7508282 Capsella rubella
Carub.0002s1171 10.0kb downstream 10.0kb downstream 12414 true scaffold_2: 7508283-7520696 Capsella rubella
Carub.0002s1171 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 7510697-7520696 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380968 5261 Brassicaceae View MSA
123836439 5264 Brassicales-Malvales View MSA
124347032 5266 SBM View MSA
124239043 5268 Malvidae View MSA
124074122 5270 Rosid View MSA
123738755 5271 Pentapetalae View MSA
122788835 5272 Eudicot View MSA
122045207 5273 Angiosperm View MSA
121349749 5274 Embryophyte View MSA
123426989 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain