Gene : Carub.0002s1066 C. rubella v1.1

Defline:  (1 of 17) PTHR22975:SF9 - F6D8.33-RELATED Genomic Order:  1066
Name:  ? Carub.0002s1066 Secondary Identifier:  ? PAC:39243721

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s1066 0.5kb upstream 0.5kb upstream 3177 true scaffold_2: 6810394-6813570 Capsella rubella
Carub.0002s1066 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 6813071-6813570 Capsella rubella
Carub.0002s1066 0.5kb downstream 0.5kb downstream 3177 true scaffold_2: 6809894-6813070 Capsella rubella
Carub.0002s1066 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 6809894-6810393 Capsella rubella
Carub.0002s1066 1.0kb upstream 1.0kb upstream 3677 true scaffold_2: 6810394-6814070 Capsella rubella
Carub.0002s1066 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 6813071-6814070 Capsella rubella
Carub.0002s1066 1.0kb downstream 1.0kb downstream 3677 true scaffold_2: 6809394-6813070 Capsella rubella
Carub.0002s1066 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 6809394-6810393 Capsella rubella
Carub.0002s1066 2.0kb upstream 2.0kb upstream 4677 true scaffold_2: 6810394-6815070 Capsella rubella
Carub.0002s1066 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 6813071-6815070 Capsella rubella
Carub.0002s1066 2.0kb downstream 2.0kb downstream 4677 true scaffold_2: 6808394-6813070 Capsella rubella
Carub.0002s1066 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 6808394-6810393 Capsella rubella
Carub.0002s1066 5.0kb upstream 5.0kb upstream 7677 true scaffold_2: 6810394-6818070 Capsella rubella
Carub.0002s1066 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 6813071-6818070 Capsella rubella
Carub.0002s1066 5.0kb downstream 5.0kb downstream 7677 true scaffold_2: 6805394-6813070 Capsella rubella
Carub.0002s1066 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 6805394-6810393 Capsella rubella
Carub.0002s1066 10.0kb upstream 10.0kb upstream 12677 true scaffold_2: 6810394-6823070 Capsella rubella
Carub.0002s1066 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 6813071-6823070 Capsella rubella
Carub.0002s1066 10.0kb downstream 10.0kb downstream 12677 true scaffold_2: 6800394-6813070 Capsella rubella
Carub.0002s1066 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 6800394-6810393 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792135 5273 Angiosperm View MSA
122381709 5261 Brassicaceae View MSA
123803390 5264 Brassicales-Malvales View MSA
124300503 5266 SBM View MSA
124151676 5268 Malvidae View MSA
123877064 5270 Rosid View MSA
123460648 5271 Pentapetalae View MSA
122796558 5272 Eudicot View MSA
121063386 5274 Embryophyte View MSA
123103139 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain