Gene : Carub.0002s1096 C. rubella v1.1
Defline:  (1 of 23) PTHR31589//PTHR31589:SF17 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 5, P1 CLONE:MZA15-RELATED Genomic Order:  1096
Name:  ? Carub.0002s1096 Secondary Identifier:  ? PAC:39244677
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s1096 0.5kb upstream 0.5kb upstream 2617 true scaffold_2: 6988528-6991144 Capsella rubella
Carub.0002s1096 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 6988528-6989027 Capsella rubella
Carub.0002s1096 0.5kb downstream 0.5kb downstream 2617 true scaffold_2: 6989028-6991644 Capsella rubella
Carub.0002s1096 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 6991145-6991644 Capsella rubella
Carub.0002s1096 1.0kb upstream 1.0kb upstream 3117 true scaffold_2: 6988028-6991144 Capsella rubella
Carub.0002s1096 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 6988028-6989027 Capsella rubella
Carub.0002s1096 1.0kb downstream 1.0kb downstream 3117 true scaffold_2: 6989028-6992144 Capsella rubella
Carub.0002s1096 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 6991145-6992144 Capsella rubella
Carub.0002s1096 2.0kb upstream 2.0kb upstream 4117 true scaffold_2: 6987028-6991144 Capsella rubella
Carub.0002s1096 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 6987028-6989027 Capsella rubella
Carub.0002s1096 2.0kb downstream 2.0kb downstream 4117 true scaffold_2: 6989028-6993144 Capsella rubella
Carub.0002s1096 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 6991145-6993144 Capsella rubella
Carub.0002s1096 5.0kb upstream 5.0kb upstream 7117 true scaffold_2: 6984028-6991144 Capsella rubella
Carub.0002s1096 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 6984028-6989027 Capsella rubella
Carub.0002s1096 5.0kb downstream 5.0kb downstream 7117 true scaffold_2: 6989028-6996144 Capsella rubella
Carub.0002s1096 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 6991145-6996144 Capsella rubella
Carub.0002s1096 10.0kb upstream 10.0kb upstream 12117 true scaffold_2: 6979028-6991144 Capsella rubella
Carub.0002s1096 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 6979028-6989027 Capsella rubella
Carub.0002s1096 10.0kb downstream 10.0kb downstream 12117 true scaffold_2: 6989028-7001144 Capsella rubella
Carub.0002s1096 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 6991145-7001144 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381411 5261 Brassicaceae View MSA
123803228 5264 Brassicales-Malvales View MSA
124300353 5266 SBM View MSA
124151552 5268 Malvidae View MSA
124074283 5270 Rosid View MSA
123753303 5271 Pentapetalae View MSA
122796959 5272 Eudicot View MSA
122051639 5273 Angiosperm View MSA
121347802 5274 Embryophyte View MSA
123380632 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain