Gene : Carub.0006s1084 C. rubella v1.1
Defline:  (1 of 1) PTHR31604:SF2 - PROTEIN SHI RELATED SEQUENCE 6 Genomic Order:  1084
Name:  ? Carub.0006s1084 Secondary Identifier:  ? PAC:39248770
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1084 0.5kb upstream 0.5kb upstream 2676 true scaffold_6: 3963440-3966115 Capsella rubella
Carub.0006s1084 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 3965616-3966115 Capsella rubella
Carub.0006s1084 0.5kb downstream 0.5kb downstream 2676 true scaffold_6: 3962940-3965615 Capsella rubella
Carub.0006s1084 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 3962940-3963439 Capsella rubella
Carub.0006s1084 1.0kb upstream 1.0kb upstream 3176 true scaffold_6: 3963440-3966615 Capsella rubella
Carub.0006s1084 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 3965616-3966615 Capsella rubella
Carub.0006s1084 1.0kb downstream 1.0kb downstream 3176 true scaffold_6: 3962440-3965615 Capsella rubella
Carub.0006s1084 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 3962440-3963439 Capsella rubella
Carub.0006s1084 2.0kb upstream 2.0kb upstream 4176 true scaffold_6: 3963440-3967615 Capsella rubella
Carub.0006s1084 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 3965616-3967615 Capsella rubella
Carub.0006s1084 2.0kb downstream 2.0kb downstream 4176 true scaffold_6: 3961440-3965615 Capsella rubella
Carub.0006s1084 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 3961440-3963439 Capsella rubella
Carub.0006s1084 5.0kb upstream 5.0kb upstream 7176 true scaffold_6: 3963440-3970615 Capsella rubella
Carub.0006s1084 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 3965616-3970615 Capsella rubella
Carub.0006s1084 5.0kb downstream 5.0kb downstream 7176 true scaffold_6: 3958440-3965615 Capsella rubella
Carub.0006s1084 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 3958440-3963439 Capsella rubella
Carub.0006s1084 10.0kb upstream 10.0kb upstream 12176 true scaffold_6: 3963440-3975615 Capsella rubella
Carub.0006s1084 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 3965616-3975615 Capsella rubella
Carub.0006s1084 10.0kb downstream 10.0kb downstream 12176 true scaffold_6: 3953440-3965615 Capsella rubella
Carub.0006s1084 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 3953440-3963439 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376722 5261 Brassicaceae View MSA
123839108 5264 Brassicales-Malvales View MSA
124351134 5266 SBM View MSA
124248636 5268 Malvidae View MSA
124069167 5270 Rosid View MSA
123749314 5271 Pentapetalae View MSA
122796752 5272 Eudicot View MSA
122049669 5273 Angiosperm View MSA
121344202 5274 Embryophyte View MSA
123379999 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain