Gene : Carub.0002s0625 C. rubella v1.1
Defline:  (1 of 3) K00510 - heme oxygenase (HMOX, hmuO, ho) Genomic Order:  625
Name:  ? Carub.0002s0625 Secondary Identifier:  ? PAC:39243890
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5874 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s0625 0.5kb upstream 0.5kb upstream 2171 true scaffold_2: 2771801-2773971 Capsella rubella
Carub.0002s0625 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 2771801-2772300 Capsella rubella
Carub.0002s0625 0.5kb downstream 0.5kb downstream 2171 true scaffold_2: 2772301-2774471 Capsella rubella
Carub.0002s0625 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 2773972-2774471 Capsella rubella
Carub.0002s0625 1.0kb upstream 1.0kb upstream 2671 true scaffold_2: 2771301-2773971 Capsella rubella
Carub.0002s0625 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 2771301-2772300 Capsella rubella
Carub.0002s0625 1.0kb downstream 1.0kb downstream 2671 true scaffold_2: 2772301-2774971 Capsella rubella
Carub.0002s0625 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 2773972-2774971 Capsella rubella
Carub.0002s0625 2.0kb upstream 2.0kb upstream 3671 true scaffold_2: 2770301-2773971 Capsella rubella
Carub.0002s0625 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 2770301-2772300 Capsella rubella
Carub.0002s0625 2.0kb downstream 2.0kb downstream 3671 true scaffold_2: 2772301-2775971 Capsella rubella
Carub.0002s0625 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 2773972-2775971 Capsella rubella
Carub.0002s0625 5.0kb upstream 5.0kb upstream 6671 true scaffold_2: 2767301-2773971 Capsella rubella
Carub.0002s0625 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 2767301-2772300 Capsella rubella
Carub.0002s0625 5.0kb downstream 5.0kb downstream 6671 true scaffold_2: 2772301-2778971 Capsella rubella
Carub.0002s0625 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 2773972-2778971 Capsella rubella
Carub.0002s0625 10.0kb upstream 10.0kb upstream 11671 true scaffold_2: 2762301-2773971 Capsella rubella
Carub.0002s0625 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 2762301-2772300 Capsella rubella
Carub.0002s0625 10.0kb downstream 10.0kb downstream 11671 true scaffold_2: 2772301-2783971 Capsella rubella
Carub.0002s0625 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 2773972-2783971 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378474 5261 Brassicaceae View MSA
123837590 5264 Brassicales-Malvales View MSA
124338986 5266 SBM View MSA
124253166 5268 Malvidae View MSA
124067644 5270 Rosid View MSA
123739396 5271 Pentapetalae View MSA
122788325 5272 Eudicot View MSA
122047622 5273 Angiosperm View MSA
121347679 5274 Embryophyte View MSA
123424297 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain