Gene : Carub.0002s0701 C. rubella v1.1
Defline:  (1 of 2) PTHR22811//PTHR22811:SF68 - TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  701
Name:  ? Carub.0002s0701 Secondary Identifier:  ? PAC:39243698
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s0701 0.5kb upstream 0.5kb upstream 2431 true scaffold_2: 3170862-3173292 Capsella rubella
Carub.0002s0701 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 3172793-3173292 Capsella rubella
Carub.0002s0701 0.5kb downstream 0.5kb downstream 2431 true scaffold_2: 3170362-3172792 Capsella rubella
Carub.0002s0701 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 3170362-3170861 Capsella rubella
Carub.0002s0701 1.0kb upstream 1.0kb upstream 2931 true scaffold_2: 3170862-3173792 Capsella rubella
Carub.0002s0701 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 3172793-3173792 Capsella rubella
Carub.0002s0701 1.0kb downstream 1.0kb downstream 2931 true scaffold_2: 3169862-3172792 Capsella rubella
Carub.0002s0701 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 3169862-3170861 Capsella rubella
Carub.0002s0701 2.0kb upstream 2.0kb upstream 3931 true scaffold_2: 3170862-3174792 Capsella rubella
Carub.0002s0701 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 3172793-3174792 Capsella rubella
Carub.0002s0701 2.0kb downstream 2.0kb downstream 3931 true scaffold_2: 3168862-3172792 Capsella rubella
Carub.0002s0701 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 3168862-3170861 Capsella rubella
Carub.0002s0701 5.0kb upstream 5.0kb upstream 6931 true scaffold_2: 3170862-3177792 Capsella rubella
Carub.0002s0701 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 3172793-3177792 Capsella rubella
Carub.0002s0701 5.0kb downstream 5.0kb downstream 6931 true scaffold_2: 3165862-3172792 Capsella rubella
Carub.0002s0701 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 3165862-3170861 Capsella rubella
Carub.0002s0701 10.0kb upstream 10.0kb upstream 11931 true scaffold_2: 3170862-3182792 Capsella rubella
Carub.0002s0701 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 3172793-3182792 Capsella rubella
Carub.0002s0701 10.0kb downstream 10.0kb downstream 11931 true scaffold_2: 3160862-3172792 Capsella rubella
Carub.0002s0701 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 3160862-3170861 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377051 5261 Brassicaceae View MSA
123801426 5264 Brassicales-Malvales View MSA
124349960 5266 SBM View MSA
124245233 5268 Malvidae View MSA
124065325 5270 Rosid View MSA
123743210 5271 Pentapetalae View MSA
122786619 5272 Eudicot View MSA
122045643 5273 Angiosperm View MSA
121349336 5274 Embryophyte View MSA
123428181 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain